Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CHD2O14647 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC30.47■■■□□ 2.47
CHD2O14647 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CHD2O14647 AL512625.2-201ENST00000417533 625 ntBASIC30.47■■■□□ 2.47
CHD2O14647 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC30.47■■■□□ 2.47
CHD2O14647 TERF1P5-201ENST00000477545 1207 ntBASIC30.47■■■□□ 2.47
CHD2O14647 EEF1DP3-203ENST00000566025 782 ntBASIC30.47■■■□□ 2.47
CHD2O14647 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC30.47■■■□□ 2.47
CHD2O14647 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CHD2O14647 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC30.47■■■□□ 2.47
CHD2O14647 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
CHD2O14647 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC30.46■■■□□ 2.47
CHD2O14647 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
CHD2O14647 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
CHD2O14647 NAA20-201ENST00000310450 920 ntTSL 2 BASIC30.45■■■□□ 2.47
CHD2O14647 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
CHD2O14647 BX276092.2-201ENST00000417668 665 ntBASIC30.45■■■□□ 2.47
CHD2O14647 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC30.45■■■□□ 2.47
CHD2O14647 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
CHD2O14647 MED17-227ENST00000640521 2047 ntTSL 5 BASIC30.45■■■□□ 2.46
CHD2O14647 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC30.45■■■□□ 2.46
CHD2O14647 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.46
CHD2O14647 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC30.45■■■□□ 2.46
CHD2O14647 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.46
CHD2O14647 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC30.44■■■□□ 2.46
CHD2O14647 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC30.44■■■□□ 2.46
CHD2O14647 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC30.44■■■□□ 2.46
CHD2O14647 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC30.44■■■□□ 2.46
CHD2O14647 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC30.44■■■□□ 2.46
CHD2O14647 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
CHD2O14647 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC30.43■■■□□ 2.46
CHD2O14647 AP006294.2-201ENST00000641667 209 ntBASIC30.43■■■□□ 2.46
CHD2O14647 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CHD2O14647 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC30.43■■■□□ 2.46
CHD2O14647 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC30.43■■■□□ 2.46
CHD2O14647 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CHD2O14647 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
CHD2O14647 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC30.42■■■□□ 2.46
CHD2O14647 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC30.42■■■□□ 2.46
CHD2O14647 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CHD2O14647 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
CHD2O14647 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CHD2O14647 FXN-202ENST00000396364 980 ntTSL 5 BASIC30.41■■■□□ 2.46
CHD2O14647 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CHD2O14647 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC30.41■■■□□ 2.46
CHD2O14647 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC30.4■■■□□ 2.46
CHD2O14647 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
CHD2O14647 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CHD2O14647 AC091874.3-201ENST00000512672 1195 ntBASIC30.4■■■□□ 2.46
CHD2O14647 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHD2O14647 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC30.4■■■□□ 2.46
CHD2O14647 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHD2O14647 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
CHD2O14647 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CHD2O14647 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC30.4■■■□□ 2.46
CHD2O14647 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC30.4■■■□□ 2.46
CHD2O14647 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC30.4■■■□□ 2.46
CHD2O14647 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CHD2O14647 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC30.39■■■□□ 2.46
CHD2O14647 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC30.39■■■□□ 2.46
CHD2O14647 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CHD2O14647 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC30.39■■■□□ 2.46
CHD2O14647 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC30.39■■■□□ 2.46
CHD2O14647 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC30.39■■■□□ 2.46
CHD2O14647 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CHD2O14647 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC30.39■■■□□ 2.46
CHD2O14647 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC30.39■■■□□ 2.46
CHD2O14647 AC006058.3-201ENST00000606217 1069 ntBASIC30.39■■■□□ 2.46
CHD2O14647 INO80E-214ENST00000620599 515 ntTSL 2 BASIC30.39■■■□□ 2.46
CHD2O14647 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CHD2O14647 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC30.39■■■□□ 2.46
CHD2O14647 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC30.39■■■□□ 2.45
CHD2O14647 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
CHD2O14647 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CHD2O14647 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHD2O14647 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC30.38■■■□□ 2.45
CHD2O14647 AL158047.1-201ENST00000445918 881 ntBASIC30.38■■■□□ 2.45
CHD2O14647 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
CHD2O14647 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC30.38■■■□□ 2.45
CHD2O14647 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHD2O14647 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHD2O14647 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHD2O14647 CASP6-205ENST00000505486 538 ntTSL 4 BASIC30.38■■■□□ 2.45
CHD2O14647 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC30.38■■■□□ 2.45
CHD2O14647 MMD2-204ENST00000612910 778 ntTSL 5 BASIC30.38■■■□□ 2.45
CHD2O14647 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CHD2O14647 AC142381.3-201ENST00000568208 1670 ntBASIC30.37■■■□□ 2.45
CHD2O14647 ESRRAP1-201ENST00000400596 1257 ntBASIC30.37■■■□□ 2.45
CHD2O14647 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC30.37■■■□□ 2.45
CHD2O14647 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC30.37■■■□□ 2.45
CHD2O14647 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CHD2O14647 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC30.37■■■□□ 2.45
CHD2O14647 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC30.37■■■□□ 2.45
CHD2O14647 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
CHD2O14647 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC30.36■■■□□ 2.45
CHD2O14647 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC30.36■■■□□ 2.45
CHD2O14647 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC30.36■■■□□ 2.45
CHD2O14647 USP36-216ENST00000589424 970 ntTSL 5 BASIC30.36■■■□□ 2.45
CHD2O14647 AC069236.1-201ENST00000604339 616 ntBASIC30.36■■■□□ 2.45
CHD2O14647 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC30.36■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms