Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC35.6■■■■□ 3.29
CHD1O14646 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC35.59■■■■□ 3.29
CHD1O14646 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC35.59■■■■□ 3.29
CHD1O14646 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC35.59■■■■□ 3.29
CHD1O14646 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
CHD1O14646 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC35.59■■■■□ 3.29
CHD1O14646 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC35.59■■■■□ 3.29
CHD1O14646 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC35.59■■■■□ 3.29
CHD1O14646 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC35.58■■■■□ 3.29
CHD1O14646 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
CHD1O14646 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC35.57■■■■□ 3.29
CHD1O14646 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.29
CHD1O14646 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC35.57■■■■□ 3.29
CHD1O14646 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC35.57■■■■□ 3.29
CHD1O14646 RNF121-214ENST00000533380 870 ntTSL 3 BASIC35.57■■■■□ 3.29
CHD1O14646 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC35.57■■■■□ 3.28
CHD1O14646 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC35.57■■■■□ 3.28
CHD1O14646 NAA20-201ENST00000310450 920 ntTSL 2 BASIC35.57■■■■□ 3.28
CHD1O14646 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC35.57■■■■□ 3.28
CHD1O14646 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC35.57■■■■□ 3.28
CHD1O14646 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC35.57■■■■□ 3.28
CHD1O14646 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC35.57■■■■□ 3.28
CHD1O14646 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC35.57■■■■□ 3.28
CHD1O14646 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC35.57■■■■□ 3.28
CHD1O14646 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC35.56■■■■□ 3.28
CHD1O14646 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC35.56■■■■□ 3.28
CHD1O14646 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC35.56■■■■□ 3.28
CHD1O14646 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC35.56■■■■□ 3.28
CHD1O14646 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC35.56■■■■□ 3.28
CHD1O14646 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC35.56■■■■□ 3.28
CHD1O14646 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC35.56■■■■□ 3.28
CHD1O14646 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC35.56■■■■□ 3.28
CHD1O14646 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC35.55■■■■□ 3.28
CHD1O14646 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
CHD1O14646 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC35.55■■■■□ 3.28
CHD1O14646 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC35.55■■■■□ 3.28
CHD1O14646 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC35.55■■■■□ 3.28
CHD1O14646 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
CHD1O14646 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC35.54■■■■□ 3.28
CHD1O14646 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
CHD1O14646 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC35.54■■■■□ 3.28
CHD1O14646 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
CHD1O14646 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
CHD1O14646 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
CHD1O14646 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC35.54■■■■□ 3.28
CHD1O14646 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
CHD1O14646 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
CHD1O14646 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC35.53■■■■□ 3.28
CHD1O14646 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC35.53■■■■□ 3.28
CHD1O14646 MIR718-201ENST00000390190 70 ntBASIC35.53■■■■□ 3.28
CHD1O14646 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC35.53■■■■□ 3.28
CHD1O14646 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC35.53■■■■□ 3.28
CHD1O14646 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC35.53■■■■□ 3.28
CHD1O14646 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC35.52■■■■□ 3.28
CHD1O14646 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC35.52■■■■□ 3.28
CHD1O14646 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
CHD1O14646 SNORA78-201ENST00000459373 127 ntBASIC35.52■■■■□ 3.28
CHD1O14646 KRT18P21-201ENST00000515767 1272 ntBASIC35.52■■■■□ 3.28
CHD1O14646 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC35.52■■■■□ 3.28
CHD1O14646 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC35.52■■■■□ 3.28
CHD1O14646 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC35.52■■■■□ 3.28
CHD1O14646 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
CHD1O14646 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC35.51■■■■□ 3.28
CHD1O14646 AC010980.2-201ENST00000587099 1412 ntBASIC35.51■■■■□ 3.28
CHD1O14646 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
CHD1O14646 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC35.51■■■■□ 3.28
CHD1O14646 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC35.51■■■■□ 3.27
CHD1O14646 AC211429.1-201ENST00000415277 523 ntBASIC35.51■■■■□ 3.27
CHD1O14646 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC35.51■■■■□ 3.27
CHD1O14646 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC35.51■■■■□ 3.27
CHD1O14646 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC35.51■■■■□ 3.27
CHD1O14646 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC35.51■■■■□ 3.27
CHD1O14646 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
CHD1O14646 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC35.5■■■■□ 3.27
CHD1O14646 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
CHD1O14646 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
CHD1O14646 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
CHD1O14646 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC35.5■■■■□ 3.27
CHD1O14646 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
CHD1O14646 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC35.5■■■■□ 3.27
CHD1O14646 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC35.5■■■■□ 3.27
CHD1O14646 FAM197Y4-202ENST00000622692 608 ntBASIC35.5■■■■□ 3.27
CHD1O14646 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC35.5■■■■□ 3.27
CHD1O14646 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
CHD1O14646 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC35.49■■■■□ 3.27
CHD1O14646 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
CHD1O14646 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
CHD1O14646 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC35.49■■■■□ 3.27
CHD1O14646 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC35.49■■■■□ 3.27
CHD1O14646 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
CHD1O14646 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC35.49■■■■□ 3.27
CHD1O14646 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC35.49■■■■□ 3.27
CHD1O14646 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC35.49■■■■□ 3.27
CHD1O14646 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC35.49■■■■□ 3.27
CHD1O14646 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
CHD1O14646 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC35.48■■■■□ 3.27
CHD1O14646 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC35.48■■■■□ 3.27
CHD1O14646 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC35.48■■■■□ 3.27
CHD1O14646 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC35.48■■■■□ 3.27
CHD1O14646 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC35.48■■■■□ 3.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms