Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.83■□□□□ 0.92
SDHDO14521 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SDHDO14521 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
SDHDO14521 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SDHDO14521 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SDHDO14521 PKD1P6-201ENST00000343738 4769 ntBASIC20.82■□□□□ 0.92
SDHDO14521 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.82■□□□□ 0.92
SDHDO14521 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SDHDO14521 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDHDO14521 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.82■□□□□ 0.92
SDHDO14521 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDHDO14521 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDHDO14521 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.82■□□□□ 0.92
SDHDO14521 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.82■□□□□ 0.92
SDHDO14521 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDHDO14521 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SDHDO14521 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDHDO14521 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SDHDO14521 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.81■□□□□ 0.92
SDHDO14521 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SDHDO14521 AL451085.2-201ENST00000605085 799 ntBASIC20.81■□□□□ 0.92
SDHDO14521 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SDHDO14521 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.81■□□□□ 0.92
SDHDO14521 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.81■□□□□ 0.92
SDHDO14521 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SDHDO14521 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.8■□□□□ 0.92
SDHDO14521 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SDHDO14521 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
SDHDO14521 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDHDO14521 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.8■□□□□ 0.92
SDHDO14521 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
SDHDO14521 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDHDO14521 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.8■□□□□ 0.92
SDHDO14521 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.8■□□□□ 0.92
SDHDO14521 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDHDO14521 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.8■□□□□ 0.92
SDHDO14521 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDHDO14521 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDHDO14521 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDHDO14521 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDHDO14521 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDHDO14521 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.79■□□□□ 0.92
SDHDO14521 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDHDO14521 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.79■□□□□ 0.92
SDHDO14521 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDHDO14521 TSPY9P-201ENST00000440215 945 ntBASIC20.79■□□□□ 0.92
SDHDO14521 TSPY11P-201ENST00000442607 1045 ntBASIC20.79■□□□□ 0.92
SDHDO14521 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SDHDO14521 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDHDO14521 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDHDO14521 OR7E47P-201ENST00000546390 1422 ntBASIC20.78■□□□□ 0.92
SDHDO14521 AC133637.1-201ENST00000624115 1537 ntBASIC20.78■□□□□ 0.92
SDHDO14521 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDHDO14521 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.78■□□□□ 0.92
SDHDO14521 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDHDO14521 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDHDO14521 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.78■□□□□ 0.92
SDHDO14521 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDHDO14521 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDHDO14521 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.78■□□□□ 0.92
SDHDO14521 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.78■□□□□ 0.92
SDHDO14521 AL117332.1-201ENST00000622628 974 ntBASIC20.78■□□□□ 0.92
SDHDO14521 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.78■□□□□ 0.92
SDHDO14521 AL157384.1-201ENST00000445995 2473 ntBASIC20.78■□□□□ 0.92
SDHDO14521 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDHDO14521 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SDHDO14521 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDHDO14521 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDHDO14521 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDHDO14521 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.77■□□□□ 0.92
SDHDO14521 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.77■□□□□ 0.92
SDHDO14521 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDHDO14521 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDHDO14521 AC239859.2-201ENST00000444165 318 ntBASIC20.77■□□□□ 0.92
SDHDO14521 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.77■□□□□ 0.92
SDHDO14521 AC104564.3-201ENST00000582367 638 ntBASIC20.77■□□□□ 0.92
SDHDO14521 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDHDO14521 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
SDHDO14521 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.77■□□□□ 0.92
SDHDO14521 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SDHDO14521 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SDHDO14521 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SDHDO14521 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SDHDO14521 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SDHDO14521 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SDHDO14521 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SDHDO14521 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SDHDO14521 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SDHDO14521 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SDHDO14521 AC006455.2-201ENST00000429931 906 ntBASIC20.76■□□□□ 0.91
SDHDO14521 AC241377.3-202ENST00000626088 1088 ntBASIC20.76■□□□□ 0.91
SDHDO14521 AC241585.3-202ENST00000628937 1088 ntBASIC20.76■□□□□ 0.91
SDHDO14521 AC245100.8-202ENST00000629247 1058 ntBASIC20.76■□□□□ 0.91
SDHDO14521 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.76■□□□□ 0.91
SDHDO14521 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.76■□□□□ 0.91
SDHDO14521 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SDHDO14521 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SDHDO14521 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SDHDO14521 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SDHDO14521 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms