Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
E2F3O00716 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
E2F3O00716 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.02■□□□□ 0.96
E2F3O00716 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
E2F3O00716 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.02■□□□□ 0.96
E2F3O00716 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
E2F3O00716 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.02■□□□□ 0.96
E2F3O00716 DUX4L19-201ENST00000557448 1267 ntBASIC21.02■□□□□ 0.96
E2F3O00716 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
E2F3O00716 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
E2F3O00716 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.02■□□□□ 0.96
E2F3O00716 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
E2F3O00716 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
E2F3O00716 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
E2F3O00716 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.02■□□□□ 0.95
E2F3O00716 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
E2F3O00716 SYT6-210ENST00000641643 1587 ntBASIC21.02■□□□□ 0.95
E2F3O00716 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
E2F3O00716 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
E2F3O00716 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.01■□□□□ 0.95
E2F3O00716 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.01■□□□□ 0.95
E2F3O00716 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
E2F3O00716 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.01■□□□□ 0.95
E2F3O00716 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.01■□□□□ 0.95
E2F3O00716 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
E2F3O00716 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.01■□□□□ 0.95
E2F3O00716 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
E2F3O00716 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
E2F3O00716 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.01■□□□□ 0.95
E2F3O00716 AC026310.3-201ENST00000625186 2373 ntBASIC21.01■□□□□ 0.95
E2F3O00716 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.01■□□□□ 0.95
E2F3O00716 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
E2F3O00716 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
E2F3O00716 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
E2F3O00716 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
E2F3O00716 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
E2F3O00716 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
E2F3O00716 AL137060.1-201ENST00000618151 2648 ntBASIC21■□□□□ 0.95
E2F3O00716 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
E2F3O00716 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21■□□□□ 0.95
E2F3O00716 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21■□□□□ 0.95
E2F3O00716 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21■□□□□ 0.95
E2F3O00716 AC092666.2-201ENST00000613287 246 ntBASIC21■□□□□ 0.95
E2F3O00716 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21■□□□□ 0.95
E2F3O00716 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
E2F3O00716 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21■□□□□ 0.95
E2F3O00716 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21■□□□□ 0.95
E2F3O00716 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
E2F3O00716 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
E2F3O00716 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
E2F3O00716 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
E2F3O00716 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
E2F3O00716 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.99■□□□□ 0.95
E2F3O00716 OR7E47P-201ENST00000546390 1422 ntBASIC20.99■□□□□ 0.95
E2F3O00716 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
E2F3O00716 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
E2F3O00716 AC024257.2-201ENST00000549699 147 ntBASIC20.99■□□□□ 0.95
E2F3O00716 AC136469.2-201ENST00000623944 1028 ntBASIC20.99■□□□□ 0.95
E2F3O00716 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
E2F3O00716 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
E2F3O00716 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
E2F3O00716 AC244015.2-201ENST00000616358 1861 ntBASIC20.98■□□□□ 0.95
E2F3O00716 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
E2F3O00716 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.98■□□□□ 0.95
E2F3O00716 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
E2F3O00716 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
E2F3O00716 EDA-201ENST00000338901 1233 ntBASIC20.98■□□□□ 0.95
E2F3O00716 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
E2F3O00716 AC010141.3-201ENST00000456659 717 ntBASIC20.98■□□□□ 0.95
E2F3O00716 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.98■□□□□ 0.95
E2F3O00716 AC011298.3-201ENST00000615796 283 ntBASIC20.98■□□□□ 0.95
E2F3O00716 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.98■□□□□ 0.95
E2F3O00716 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
E2F3O00716 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
E2F3O00716 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
E2F3O00716 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
E2F3O00716 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
E2F3O00716 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.97■□□□□ 0.95
E2F3O00716 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
E2F3O00716 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
E2F3O00716 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.97■□□□□ 0.95
E2F3O00716 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.97■□□□□ 0.95
E2F3O00716 AC087239.1-201ENST00000622671 572 ntBASIC20.97■□□□□ 0.95
E2F3O00716 AC026471.6-201ENST00000622954 1905 ntBASIC20.97■□□□□ 0.95
E2F3O00716 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
E2F3O00716 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
E2F3O00716 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
E2F3O00716 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.97■□□□□ 0.95
E2F3O00716 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
E2F3O00716 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
E2F3O00716 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
E2F3O00716 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
E2F3O00716 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
E2F3O00716 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
E2F3O00716 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
E2F3O00716 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.96■□□□□ 0.95
E2F3O00716 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
E2F3O00716 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
E2F3O00716 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
E2F3O00716 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms