Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPSF4LA6NMK7 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
CPSF4LA6NMK7 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CPSF4LA6NMK7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CPSF4LA6NMK7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CPSF4LA6NMK7 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.84■□□□□ 0.77
CPSF4LA6NMK7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CPSF4LA6NMK7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPSF4LA6NMK7 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.84■□□□□ 0.77
CPSF4LA6NMK7 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CPSF4LA6NMK7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CPSF4LA6NMK7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPSF4LA6NMK7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPSF4LA6NMK7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.83■□□□□ 0.77
CPSF4LA6NMK7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.83■□□□□ 0.77
CPSF4LA6NMK7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPSF4LA6NMK7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
CPSF4LA6NMK7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CPSF4LA6NMK7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CPSF4LA6NMK7 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.83■□□□□ 0.77
CPSF4LA6NMK7 AC079089.2-201ENST00000531211 1277 ntBASIC19.83■□□□□ 0.77
CPSF4LA6NMK7 AL512631.2-201ENST00000604634 923 ntBASIC19.83■□□□□ 0.77
CPSF4LA6NMK7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.83■□□□□ 0.77
CPSF4LA6NMK7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CPSF4LA6NMK7 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.83■□□□□ 0.76
CPSF4LA6NMK7 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.76
CPSF4LA6NMK7 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CPSF4LA6NMK7 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CPSF4LA6NMK7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CPSF4LA6NMK7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
CPSF4LA6NMK7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
CPSF4LA6NMK7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.83■□□□□ 0.76
CPSF4LA6NMK7 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.82■□□□□ 0.76
CPSF4LA6NMK7 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF4LA6NMK7 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF4LA6NMK7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF4LA6NMK7 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF4LA6NMK7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF4LA6NMK7 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.82■□□□□ 0.76
CPSF4LA6NMK7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF4LA6NMK7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF4LA6NMK7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF4LA6NMK7 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF4LA6NMK7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF4LA6NMK7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CPSF4LA6NMK7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 AL356441.2-201ENST00000443009 864 ntBASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.81■□□□□ 0.76
CPSF4LA6NMK7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 AC092171.4-201ENST00000609130 632 ntBASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.8■□□□□ 0.76
CPSF4LA6NMK7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF4LA6NMK7 AC244015.2-201ENST00000616358 1861 ntBASIC19.79■□□□□ 0.76
CPSF4LA6NMK7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF4LA6NMK7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF4LA6NMK7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CPSF4LA6NMK7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CPSF4LA6NMK7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms