Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCP4L1A6NKN8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
PCP4L1A6NKN8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCP4L1A6NKN8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.99■□□□□ 0.31
PCP4L1A6NKN8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCP4L1A6NKN8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.99■□□□□ 0.31
PCP4L1A6NKN8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCP4L1A6NKN8 AC104581.1-202ENST00000635932 2618 ntBASIC16.99■□□□□ 0.31
PCP4L1A6NKN8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCP4L1A6NKN8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
PCP4L1A6NKN8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCP4L1A6NKN8 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCP4L1A6NKN8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCP4L1A6NKN8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCP4L1A6NKN8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCP4L1A6NKN8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCP4L1A6NKN8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
PCP4L1A6NKN8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC16.99■□□□□ 0.31
PCP4L1A6NKN8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCP4L1A6NKN8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.99■□□□□ 0.31
PCP4L1A6NKN8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCP4L1A6NKN8 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.98■□□□□ 0.31
PCP4L1A6NKN8 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCP4L1A6NKN8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCP4L1A6NKN8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCP4L1A6NKN8 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PCP4L1A6NKN8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
PCP4L1A6NKN8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCP4L1A6NKN8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.98■□□□□ 0.31
PCP4L1A6NKN8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCP4L1A6NKN8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCP4L1A6NKN8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCP4L1A6NKN8 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCP4L1A6NKN8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCP4L1A6NKN8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCP4L1A6NKN8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCP4L1A6NKN8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 AC007613.1-201ENST00000572811 2597 ntBASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 AC004408.2-201ENST00000623613 2777 ntBASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCP4L1A6NKN8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCP4L1A6NKN8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCP4L1A6NKN8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCP4L1A6NKN8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
PCP4L1A6NKN8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCP4L1A6NKN8 AC020916.1-201ENST00000587762 1774 ntBASIC16.96■□□□□ 0.31
PCP4L1A6NKN8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCP4L1A6NKN8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCP4L1A6NKN8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCP4L1A6NKN8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCP4L1A6NKN8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCP4L1A6NKN8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
PCP4L1A6NKN8 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCP4L1A6NKN8 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCP4L1A6NKN8 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.95■□□□□ 0.3
PCP4L1A6NKN8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCP4L1A6NKN8 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCP4L1A6NKN8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PCP4L1A6NKN8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.95■□□□□ 0.3
PCP4L1A6NKN8 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCP4L1A6NKN8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC16.95■□□□□ 0.3
PCP4L1A6NKN8 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC16.95■□□□□ 0.3
PCP4L1A6NKN8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCP4L1A6NKN8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PCP4L1A6NKN8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PCP4L1A6NKN8 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCP4L1A6NKN8 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC16.94■□□□□ 0.3
PCP4L1A6NKN8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCP4L1A6NKN8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCP4L1A6NKN8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCP4L1A6NKN8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCP4L1A6NKN8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCP4L1A6NKN8 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCP4L1A6NKN8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCP4L1A6NKN8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC16.94■□□□□ 0.3
PCP4L1A6NKN8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCP4L1A6NKN8 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCP4L1A6NKN8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCP4L1A6NKN8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCP4L1A6NKN8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCP4L1A6NKN8 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms