Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEM235A6NFC5 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
TMEM235A6NFC5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM235A6NFC5 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.35■□□□□ 0.53
TMEM235A6NFC5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM235A6NFC5 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.35■□□□□ 0.53
TMEM235A6NFC5 AC103724.3-201ENST00000564481 992 ntBASIC18.35■□□□□ 0.53
TMEM235A6NFC5 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TMEM235A6NFC5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM235A6NFC5 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM235A6NFC5 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TMEM235A6NFC5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM235A6NFC5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TMEM235A6NFC5 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM235A6NFC5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM235A6NFC5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TMEM235A6NFC5 KRT8P33-201ENST00000508125 1423 ntBASIC18.34■□□□□ 0.53
TMEM235A6NFC5 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM235A6NFC5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM235A6NFC5 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM235A6NFC5 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.34■□□□□ 0.53
TMEM235A6NFC5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.34■□□□□ 0.53
TMEM235A6NFC5 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC18.34■□□□□ 0.53
TMEM235A6NFC5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC18.34■□□□□ 0.53
TMEM235A6NFC5 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
TMEM235A6NFC5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM235A6NFC5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM235A6NFC5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM235A6NFC5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM235A6NFC5 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
TMEM235A6NFC5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM235A6NFC5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM235A6NFC5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TMEM235A6NFC5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.33■□□□□ 0.53
TMEM235A6NFC5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEM235A6NFC5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.33■□□□□ 0.53
TMEM235A6NFC5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TMEM235A6NFC5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM235A6NFC5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.33■□□□□ 0.52
TMEM235A6NFC5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM235A6NFC5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM235A6NFC5 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEM235A6NFC5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.33■□□□□ 0.52
TMEM235A6NFC5 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM235A6NFC5 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.33■□□□□ 0.52
TMEM235A6NFC5 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
TMEM235A6NFC5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM235A6NFC5 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TMEM235A6NFC5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.33■□□□□ 0.52
TMEM235A6NFC5 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 AC009102.2-201ENST00000606772 1639 ntBASIC18.32■□□□□ 0.52
TMEM235A6NFC5 CLTA-206ENST00000466396 695 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TMEM235A6NFC5 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM235A6NFC5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TMEM235A6NFC5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM235A6NFC5 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
TMEM235A6NFC5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM235A6NFC5 YBX1P4-201ENST00000392794 808 ntBASIC18.31■□□□□ 0.52
TMEM235A6NFC5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.31■□□□□ 0.52
TMEM235A6NFC5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM235A6NFC5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.31■□□□□ 0.52
TMEM235A6NFC5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
TMEM235A6NFC5 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM235A6NFC5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM235A6NFC5 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM235A6NFC5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM235A6NFC5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM235A6NFC5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TMEM235A6NFC5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.31■□□□□ 0.52
TMEM235A6NFC5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM235A6NFC5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM235A6NFC5 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM235A6NFC5 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TMEM235A6NFC5 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM235A6NFC5 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TMEM235A6NFC5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TMEM235A6NFC5 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
TMEM235A6NFC5 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms