Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.33■■□□□ 1
TRBV5-4A0A0C4DH59 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRBV5-4A0A0C4DH59 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.33■■□□□ 1
TRBV5-4A0A0C4DH59 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
TRBV5-4A0A0C4DH59 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.32■■□□□ 1
TRBV5-4A0A0C4DH59 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV5-4A0A0C4DH59 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV5-4A0A0C4DH59 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV5-4A0A0C4DH59 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
TRBV5-4A0A0C4DH59 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV5-4A0A0C4DH59 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRBV5-4A0A0C4DH59 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.32■■□□□ 1
TRBV5-4A0A0C4DH59 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
TRBV5-4A0A0C4DH59 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.32■■□□□ 1
TRBV5-4A0A0C4DH59 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 AL354811.1-201ENST00000610286 706 ntBASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 AL358852.1-201ENST00000623174 1268 ntBASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.31■■□□□ 1
TRBV5-4A0A0C4DH59 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TRBV5-4A0A0C4DH59 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRBV5-4A0A0C4DH59 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRBV5-4A0A0C4DH59 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRBV5-4A0A0C4DH59 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.3■■□□□ 1
TRBV5-4A0A0C4DH59 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
TRBV5-4A0A0C4DH59 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.3■■□□□ 1
TRBV5-4A0A0C4DH59 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.3■■□□□ 1
TRBV5-4A0A0C4DH59 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRBV5-4A0A0C4DH59 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.3■■□□□ 1
TRBV5-4A0A0C4DH59 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRBV5-4A0A0C4DH59 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.3■■□□□ 1
TRBV5-4A0A0C4DH59 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
TRBV5-4A0A0C4DH59 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.29■■□□□ 1
TRBV5-4A0A0C4DH59 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
TRBV5-4A0A0C4DH59 BX005040.4-201ENST00000637145 1518 ntBASIC21.29■■□□□ 1
TRBV5-4A0A0C4DH59 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRBV5-4A0A0C4DH59 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRBV5-4A0A0C4DH59 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRBV5-4A0A0C4DH59 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.29■■□□□ 1
TRBV5-4A0A0C4DH59 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.29■■□□□ 1
TRBV5-4A0A0C4DH59 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.29■■□□□ 1
TRBV5-4A0A0C4DH59 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.29■■□□□ 1
TRBV5-4A0A0C4DH59 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.29■■□□□ 1
TRBV5-4A0A0C4DH59 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.29■■□□□ 1
TRBV5-4A0A0C4DH59 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.29■■□□□ 1
TRBV5-4A0A0C4DH59 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
TRBV5-4A0A0C4DH59 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRBV5-4A0A0C4DH59 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TRBV5-4A0A0C4DH59 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRBV5-4A0A0C4DH59 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.28■■□□□ 1
TRBV5-4A0A0C4DH59 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRBV5-4A0A0C4DH59 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.28■■□□□ 1
TRBV5-4A0A0C4DH59 ZNRF2P3-201ENST00000424200 374 ntBASIC21.28■■□□□ 1
TRBV5-4A0A0C4DH59 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
TRBV5-4A0A0C4DH59 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.28■■□□□ 1
TRBV5-4A0A0C4DH59 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRBV5-4A0A0C4DH59 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-4A0A0C4DH59 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-4A0A0C4DH59 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-4A0A0C4DH59 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-4A0A0C4DH59 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-4A0A0C4DH59 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.27■■□□□ 1
TRBV5-4A0A0C4DH59 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-4A0A0C4DH59 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-4A0A0C4DH59 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.27■■□□□ 1
TRBV5-4A0A0C4DH59 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-4A0A0C4DH59 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-4A0A0C4DH59 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRBV5-4A0A0C4DH59 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.27■□□□□ 0.99
TRBV5-4A0A0C4DH59 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRBV5-4A0A0C4DH59 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV5-4A0A0C4DH59 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV5-4A0A0C4DH59 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.26■□□□□ 0.99
TRBV5-4A0A0C4DH59 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TRBV5-4A0A0C4DH59 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV5-4A0A0C4DH59 AC026471.6-201ENST00000622954 1905 ntBASIC21.26■□□□□ 0.99
TRBV5-4A0A0C4DH59 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
TRBV5-4A0A0C4DH59 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV5-4A0A0C4DH59 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRBV5-4A0A0C4DH59 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.26■□□□□ 0.99
TRBV5-4A0A0C4DH59 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.26■□□□□ 0.99
TRBV5-4A0A0C4DH59 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.26■□□□□ 0.99
TRBV5-4A0A0C4DH59 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TRBV5-4A0A0C4DH59 AC009237.3-201ENST00000393279 1427 ntBASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms