Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC27.74■■■□□ 2.03
LOC102724428A0A0B4J2F2 MARS-234ENST00000630571 216 ntTSL 5 BASIC27.74■■■□□ 2.03
LOC102724428A0A0B4J2F2 MARS-235ENST00000630803 183 ntTSL 3 BASIC27.74■■■□□ 2.03
LOC102724428A0A0B4J2F2 AC013268.1-206ENST00000638368 961 ntBASIC27.74■■■□□ 2.03
LOC102724428A0A0B4J2F2 AC112229.1-201ENST00000639295 961 ntBASIC27.74■■■□□ 2.03
LOC102724428A0A0B4J2F2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC27.74■■■□□ 2.03
LOC102724428A0A0B4J2F2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC27.74■■■□□ 2.03
LOC102724428A0A0B4J2F2 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC27.74■■■□□ 2.03
LOC102724428A0A0B4J2F2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC27.73■■■□□ 2.03
LOC102724428A0A0B4J2F2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
LOC102724428A0A0B4J2F2 AC079089.2-201ENST00000531211 1277 ntBASIC27.73■■■□□ 2.03
LOC102724428A0A0B4J2F2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC27.73■■■□□ 2.03
LOC102724428A0A0B4J2F2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC27.73■■■□□ 2.03
LOC102724428A0A0B4J2F2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC27.73■■■□□ 2.03
LOC102724428A0A0B4J2F2 ITM2C-210ENST00000620962 501 ntBASIC27.73■■■□□ 2.03
LOC102724428A0A0B4J2F2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC27.73■■■□□ 2.03
LOC102724428A0A0B4J2F2 AC068338.2-201ENST00000563278 1430 ntBASIC27.73■■■□□ 2.03
LOC102724428A0A0B4J2F2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
LOC102724428A0A0B4J2F2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
LOC102724428A0A0B4J2F2 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC27.73■■■□□ 2.03
LOC102724428A0A0B4J2F2 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
LOC102724428A0A0B4J2F2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
LOC102724428A0A0B4J2F2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC27.72■■■□□ 2.03
LOC102724428A0A0B4J2F2 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC27.72■■■□□ 2.03
LOC102724428A0A0B4J2F2 TERF1P5-201ENST00000477545 1207 ntBASIC27.72■■■□□ 2.03
LOC102724428A0A0B4J2F2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
LOC102724428A0A0B4J2F2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
LOC102724428A0A0B4J2F2 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
LOC102724428A0A0B4J2F2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
LOC102724428A0A0B4J2F2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
LOC102724428A0A0B4J2F2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
LOC102724428A0A0B4J2F2 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC27.71■■■□□ 2.03
LOC102724428A0A0B4J2F2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC27.71■■■□□ 2.03
LOC102724428A0A0B4J2F2 MIPEPP3-201ENST00000412105 444 ntBASIC27.71■■■□□ 2.03
LOC102724428A0A0B4J2F2 CYP2T1P-201ENST00000432607 1285 ntBASIC27.71■■■□□ 2.03
LOC102724428A0A0B4J2F2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
LOC102724428A0A0B4J2F2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC27.71■■■□□ 2.03
LOC102724428A0A0B4J2F2 SLC7A5P1-201ENST00000568957 537 ntBASIC27.71■■■□□ 2.03
LOC102724428A0A0B4J2F2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC27.71■■■□□ 2.03
LOC102724428A0A0B4J2F2 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC27.7■■■□□ 2.03
LOC102724428A0A0B4J2F2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC27.7■■■□□ 2.03
LOC102724428A0A0B4J2F2 FXN-202ENST00000396364 980 ntTSL 5 BASIC27.7■■■□□ 2.02
LOC102724428A0A0B4J2F2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC27.7■■■□□ 2.02
LOC102724428A0A0B4J2F2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC27.7■■■□□ 2.02
LOC102724428A0A0B4J2F2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
LOC102724428A0A0B4J2F2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC27.7■■■□□ 2.02
LOC102724428A0A0B4J2F2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
LOC102724428A0A0B4J2F2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
LOC102724428A0A0B4J2F2 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC27.7■■■□□ 2.02
LOC102724428A0A0B4J2F2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC27.7■■■□□ 2.02
LOC102724428A0A0B4J2F2 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC27.7■■■□□ 2.02
LOC102724428A0A0B4J2F2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC27.7■■■□□ 2.02
LOC102724428A0A0B4J2F2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
LOC102724428A0A0B4J2F2 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.69■■■□□ 2.02
LOC102724428A0A0B4J2F2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
LOC102724428A0A0B4J2F2 AP004607.7-201ENST00000527152 1677 ntBASIC27.69■■■□□ 2.02
LOC102724428A0A0B4J2F2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
LOC102724428A0A0B4J2F2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
LOC102724428A0A0B4J2F2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
LOC102724428A0A0B4J2F2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC27.69■■■□□ 2.02
LOC102724428A0A0B4J2F2 PPP1R14BP2-201ENST00000426284 444 ntBASIC27.69■■■□□ 2.02
LOC102724428A0A0B4J2F2 RNA5SP413-201ENST00000516373 109 ntBASIC27.69■■■□□ 2.02
LOC102724428A0A0B4J2F2 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC27.69■■■□□ 2.02
LOC102724428A0A0B4J2F2 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC27.69■■■□□ 2.02
LOC102724428A0A0B4J2F2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
LOC102724428A0A0B4J2F2 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
LOC102724428A0A0B4J2F2 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
LOC102724428A0A0B4J2F2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
LOC102724428A0A0B4J2F2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC27.68■■■□□ 2.02
LOC102724428A0A0B4J2F2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC27.68■■■□□ 2.02
LOC102724428A0A0B4J2F2 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC27.68■■■□□ 2.02
LOC102724428A0A0B4J2F2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC27.68■■■□□ 2.02
LOC102724428A0A0B4J2F2 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
LOC102724428A0A0B4J2F2 MKRN4P-201ENST00000444706 1521 ntBASIC27.67■■■□□ 2.02
LOC102724428A0A0B4J2F2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC27.67■■■□□ 2.02
LOC102724428A0A0B4J2F2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC27.67■■■□□ 2.02
LOC102724428A0A0B4J2F2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
LOC102724428A0A0B4J2F2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
LOC102724428A0A0B4J2F2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC27.67■■■□□ 2.02
LOC102724428A0A0B4J2F2 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC27.67■■■□□ 2.02
LOC102724428A0A0B4J2F2 PRORSD1P-201ENST00000295112 541 ntBASIC27.66■■■□□ 2.02
LOC102724428A0A0B4J2F2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
LOC102724428A0A0B4J2F2 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
LOC102724428A0A0B4J2F2 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC27.66■■■□□ 2.02
LOC102724428A0A0B4J2F2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC27.66■■■□□ 2.02
LOC102724428A0A0B4J2F2 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
LOC102724428A0A0B4J2F2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC27.66■■■□□ 2.02
LOC102724428A0A0B4J2F2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC27.66■■■□□ 2.02
LOC102724428A0A0B4J2F2 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
LOC102724428A0A0B4J2F2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
LOC102724428A0A0B4J2F2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
LOC102724428A0A0B4J2F2 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC27.65■■■□□ 2.02
LOC102724428A0A0B4J2F2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
LOC102724428A0A0B4J2F2 KRT18P29-201ENST00000397031 1267 ntBASIC27.65■■■□□ 2.02
LOC102724428A0A0B4J2F2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC27.65■■■□□ 2.02
LOC102724428A0A0B4J2F2 AC007322.4-201ENST00000509611 723 ntBASIC27.65■■■□□ 2.02
LOC102724428A0A0B4J2F2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC27.65■■■□□ 2.02
LOC102724428A0A0B4J2F2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
LOC102724428A0A0B4J2F2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
LOC102724428A0A0B4J2F2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms