Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAV1-2A0A0B4J238 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV1-2A0A0B4J238 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV1-2A0A0B4J238 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV1-2A0A0B4J238 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV1-2A0A0B4J238 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV1-2A0A0B4J238 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV1-2A0A0B4J238 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TRAV1-2A0A0B4J238 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV1-2A0A0B4J238 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV1-2A0A0B4J238 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV1-2A0A0B4J238 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
TRAV1-2A0A0B4J238 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV1-2A0A0B4J238 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV1-2A0A0B4J238 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV1-2A0A0B4J238 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAV1-2A0A0B4J238 MIR4508-201ENST00000584178 70 ntBASIC18.73■□□□□ 0.59
TRAV1-2A0A0B4J238 AC137630.3-201ENST00000607245 391 ntBASIC18.73■□□□□ 0.59
TRAV1-2A0A0B4J238 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV1-2A0A0B4J238 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAV1-2A0A0B4J238 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.73■□□□□ 0.59
TRAV1-2A0A0B4J238 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV1-2A0A0B4J238 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAV1-2A0A0B4J238 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TRAV1-2A0A0B4J238 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV1-2A0A0B4J238 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV1-2A0A0B4J238 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV1-2A0A0B4J238 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.72■□□□□ 0.59
TRAV1-2A0A0B4J238 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV1-2A0A0B4J238 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TRAV1-2A0A0B4J238 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV1-2A0A0B4J238 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV1-2A0A0B4J238 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV1-2A0A0B4J238 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV1-2A0A0B4J238 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 C17orf82-201ENST00000623772 1530 ntBASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 AC026471.6-201ENST00000622954 1905 ntBASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 AC010980.1-201ENST00000587192 1142 ntBASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 LINC01006-201ENST00000333319 2292 ntBASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV1-2A0A0B4J238 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
TRAV1-2A0A0B4J238 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TRAV1-2A0A0B4J238 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.7■□□□□ 0.58
TRAV1-2A0A0B4J238 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRAV1-2A0A0B4J238 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV1-2A0A0B4J238 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAV1-2A0A0B4J238 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRAV1-2A0A0B4J238 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRAV1-2A0A0B4J238 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV1-2A0A0B4J238 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
TRAV1-2A0A0B4J238 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.7■□□□□ 0.58
TRAV1-2A0A0B4J238 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
TRAV1-2A0A0B4J238 AC079089.2-201ENST00000531211 1277 ntBASIC18.7■□□□□ 0.58
TRAV1-2A0A0B4J238 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.7■□□□□ 0.58
TRAV1-2A0A0B4J238 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV1-2A0A0B4J238 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 FEM1AP1-201ENST00000431297 1995 ntBASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.69■□□□□ 0.58
TRAV1-2A0A0B4J238 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV1-2A0A0B4J238 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRAV1-2A0A0B4J238 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV1-2A0A0B4J238 AC009102.2-201ENST00000606772 1639 ntBASIC18.68■□□□□ 0.58
TRAV1-2A0A0B4J238 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRAV1-2A0A0B4J238 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms