Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.16■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.16■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC15.15■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC15.15■□□□□ 0.02
TRAV8-3A0A0A6YYJ7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms