Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV6-8A0A0A6YYG3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV6-8A0A0A6YYG3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
TRBV6-8A0A0A6YYG3 HES6-206ENST00000409574 738 ntTSL 2 BASIC14.99□□□□□ -0.01
TRBV6-8A0A0A6YYG3 PTCHD3P2-201ENST00000424937 1205 ntBASIC14.99□□□□□ -0.01
TRBV6-8A0A0A6YYG3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.99□□□□□ -0.01
TRBV6-8A0A0A6YYG3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC14.99□□□□□ -0.01
TRBV6-8A0A0A6YYG3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC14.99□□□□□ -0.01
TRBV6-8A0A0A6YYG3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.99□□□□□ -0.01
TRBV6-8A0A0A6YYG3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
TRBV6-8A0A0A6YYG3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
TRBV6-8A0A0A6YYG3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV6-8A0A0A6YYG3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV6-8A0A0A6YYG3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
TRBV6-8A0A0A6YYG3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
TRBV6-8A0A0A6YYG3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV6-8A0A0A6YYG3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRBV6-8A0A0A6YYG3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV6-8A0A0A6YYG3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC14.97□□□□□ -0.01
TRBV6-8A0A0A6YYG3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV6-8A0A0A6YYG3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV6-8A0A0A6YYG3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV6-8A0A0A6YYG3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV6-8A0A0A6YYG3 AC010141.3-201ENST00000456659 717 ntBASIC14.97□□□□□ -0.01
TRBV6-8A0A0A6YYG3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC14.97□□□□□ -0.01
TRBV6-8A0A0A6YYG3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
TRBV6-8A0A0A6YYG3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
TRBV6-8A0A0A6YYG3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TRBV6-8A0A0A6YYG3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC14.97□□□□□ -0.01
TRBV6-8A0A0A6YYG3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
TRBV6-8A0A0A6YYG3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC14.96□□□□□ -0.01
TRBV6-8A0A0A6YYG3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-8A0A0A6YYG3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRBV6-8A0A0A6YYG3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-8A0A0A6YYG3 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-8A0A0A6YYG3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TRBV6-8A0A0A6YYG3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TRBV6-8A0A0A6YYG3 SERBP1P1-201ENST00000396021 1160 ntBASIC14.96□□□□□ -0.01
TRBV6-8A0A0A6YYG3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.96□□□□□ -0.01
TRBV6-8A0A0A6YYG3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TRBV6-8A0A0A6YYG3 AC244015.2-201ENST00000616358 1861 ntBASIC14.96□□□□□ -0.01
TRBV6-8A0A0A6YYG3 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV6-8A0A0A6YYG3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC14.96□□□□□ -0.01
TRBV6-8A0A0A6YYG3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV6-8A0A0A6YYG3 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRBV6-8A0A0A6YYG3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRBV6-8A0A0A6YYG3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-8A0A0A6YYG3 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-8A0A0A6YYG3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-8A0A0A6YYG3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRBV6-8A0A0A6YYG3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-8A0A0A6YYG3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-8A0A0A6YYG3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC14.95□□□□□ -0.02
TRBV6-8A0A0A6YYG3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
TRBV6-8A0A0A6YYG3 MIR4466-201ENST00000606121 54 ntBASIC14.95□□□□□ -0.02
TRBV6-8A0A0A6YYG3 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-8A0A0A6YYG3 AC011298.3-201ENST00000615796 283 ntBASIC14.95□□□□□ -0.02
TRBV6-8A0A0A6YYG3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-8A0A0A6YYG3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC14.95□□□□□ -0.02
TRBV6-8A0A0A6YYG3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-8A0A0A6YYG3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-8A0A0A6YYG3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-8A0A0A6YYG3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV6-8A0A0A6YYG3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC14.95□□□□□ -0.02
TRBV6-8A0A0A6YYG3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC14.94□□□□□ -0.02
TRBV6-8A0A0A6YYG3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRBV6-8A0A0A6YYG3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-8A0A0A6YYG3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
TRBV6-8A0A0A6YYG3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-8A0A0A6YYG3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.94□□□□□ -0.02
TRBV6-8A0A0A6YYG3 OXCT2P1-201ENST00000447263 1535 ntBASIC14.94□□□□□ -0.02
TRBV6-8A0A0A6YYG3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-8A0A0A6YYG3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC14.94□□□□□ -0.02
TRBV6-8A0A0A6YYG3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-8A0A0A6YYG3 AC136469.2-201ENST00000623944 1028 ntBASIC14.94□□□□□ -0.02
TRBV6-8A0A0A6YYG3 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC14.94□□□□□ -0.02
TRBV6-8A0A0A6YYG3 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-8A0A0A6YYG3 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-8A0A0A6YYG3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV6-8A0A0A6YYG3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms