Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 SLC8A3-210ENST00000534137 2837 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 ATP6V1G2-DDX39B-201ENST00000376185 2039 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 LRRC18-201ENST00000374160 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 C1orf131-201ENST00000318906 2483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 AC092335.1-201ENST00000509037 2066 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 SERPINA5-203ENST00000553780 2071 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 RPL30-201ENST00000287038 543 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 RPL18AP15-201ENST00000430258 517 ntBASIC12.78□□□□□ -0.36
LMO3Q8TAP4 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 SAP18P2-201ENST00000434334 459 ntBASIC12.78□□□□□ -0.36
LMO3Q8TAP4 DDTP1-201ENST00000443589 383 ntBASIC12.78□□□□□ -0.36
LMO3Q8TAP4 LINC00879-202ENST00000463200 1041 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 RN7SL477P-201ENST00000488440 286 ntBASIC12.78□□□□□ -0.36
LMO3Q8TAP4 AP001922.3-201ENST00000524768 842 ntTSL 3 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 DENND5B-AS1-202ENST00000537346 1106 ntTSL 3 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 AC009654.1-201ENST00000560503 757 ntTSL 3 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 MT1L-201ENST00000565768 411 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 MT1G-204ENST00000569500 305 ntTSL 3 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 AC004134.1-201ENST00000587835 225 ntBASIC12.78□□□□□ -0.36
LMO3Q8TAP4 BPIFA1-204ENST00000618484 907 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 AL627230.3-201ENST00000622239 192 ntBASIC12.78□□□□□ -0.36
LMO3Q8TAP4 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 DDX27-201ENST00000371764 2643 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 TMEM38B-202ENST00000374692 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 FBP2-201ENST00000375337 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 LRRC27-202ENST00000368612 1765 ntTSL 2 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 TRIM2-209ENST00000494872 2202 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 PRDM2-204ENST00000376048 2688 ntTSL 2 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 DENND2A-209ENST00000496613 3562 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 PNPLA6-203ENST00000450331 4457 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 COQ10A-203ENST00000546544 1369 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 FAM90A27P-201ENST00000593323 1370 ntBASIC12.78□□□□□ -0.36
LMO3Q8TAP4 CLPB-201ENST00000294053 3240 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 ETFDH-206ENST00000511912 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 MYL9-201ENST00000279022 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 HTR3E-206ENST00000440596 1449 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 SPCS1-206ENST00000619898 4254 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 PMS2-201ENST00000265849 2855 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 ZSCAN5A-205ENST00000587340 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 SCN3B-206ENST00000530277 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 GSDMB-212ENST00000520542 1546 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 RAE1-209ENST00000527947 1503 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
LMO3Q8TAP4 ZNF16-201ENST00000276816 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LMO3Q8TAP4 USP17L4-201ENST00000526929 1593 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
LMO3Q8TAP4 USP17L1-201ENST00000529559 1593 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
LMO3Q8TAP4 USP17L3-201ENST00000530484 1593 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
LMO3Q8TAP4 VTA1-203ENST00000452973 3177 ntTSL 2 BASIC12.77□□□□□ -0.36
LMO3Q8TAP4 PRKG2-201ENST00000264399 4822 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
LMO3Q8TAP4 PCID2-204ENST00000375459 1668 ntTSL 2 BASIC12.77□□□□□ -0.36
LMO3Q8TAP4 ITPRIP-203ENST00000358187 3981 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
LMO3Q8TAP4 DPY19L2P3-201ENST00000414296 2326 ntBASIC12.77□□□□□ -0.36
LMO3Q8TAP4 PLOD1-201ENST00000196061 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LMO3Q8TAP4 RIC3-203ENST00000343202 2929 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
LMO3Q8TAP4 CLP1-203ENST00000529430 1778 ntTSL 5 BASIC12.77□□□□□ -0.36
LMO3Q8TAP4 SGK3-202ENST00000396596 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
LMO3Q8TAP4 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 PDE9A-211ENST00000398232 1885 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 ATP2A1-203ENST00000536376 3130 ntTSL 2 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 CEP83-203ENST00000397809 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 ZNF140-201ENST00000319849 596 ntTSL 5 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 OR2A14-201ENST00000408899 1012 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 AC073254.1-201ENST00000415506 1162 ntTSL 5 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 HNRNPA1P59-201ENST00000430583 918 ntBASIC12.77□□□□□ -0.37
LMO3Q8TAP4 AC006960.2-201ENST00000435254 531 ntTSL 4 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 AC023886.1-202ENST00000504009 477 ntTSL 3 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 AC010280.2-201ENST00000507733 410 ntTSL 2 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 HOPX-209ENST00000508121 904 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 AP006287.1-201ENST00000533995 653 ntBASIC12.77□□□□□ -0.37
LMO3Q8TAP4 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 AC079310.1-201ENST00000552524 700 ntTSL 3 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 AP003096.1-201ENST00000565199 503 ntTSL 3 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 AC010547.1-202ENST00000567341 230 ntTSL 2 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 AC073254.1-213ENST00000596622 704 ntTSL 5 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 AC073254.1-211ENST00000598700 761 ntTSL 5 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 ZNF548-209ENST00000598895 571 ntTSL 4 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 AC007274.3-201ENST00000619838 385 ntBASIC12.77□□□□□ -0.37
LMO3Q8TAP4 CASP7-204ENST00000369321 2620 ntTSL 2 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 IGF2BP1-202ENST00000431824 1317 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 GAS8-220ENST00000620723 3308 ntTSL 2 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 MKLN1-AS-202ENST00000429067 2043 ntTSL 2 BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 RGN-201ENST00000336169 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 AARS-201ENST00000261772 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
LMO3Q8TAP4 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms