Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 PM20D1-201ENST00000367136 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 EPHB2-202ENST00000374630 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 HERC6-203ENST00000380265 3781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 KRBA1-201ENST00000319551 4020 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 HADHB-201ENST00000317799 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 AC005695.1-201ENST00000574307 5672 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 AL353801.2-201ENST00000436877 1444 ntTSL 5 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 TRMT10B-201ENST00000297994 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 RECQL5-201ENST00000317905 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 LINC01254-201ENST00000566225 2908 ntBASIC12.81□□□□□ -0.36
LMO3Q8TAP4 RASAL1-201ENST00000261729 3382 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 ZNF185-210ENST00000454925 3191 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 TFAM-201ENST00000373895 973 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC12.81□□□□□ -0.36
LMO3Q8TAP4 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 AC004980.2-201ENST00000423648 497 ntBASIC12.81□□□□□ -0.36
LMO3Q8TAP4 AC074019.1-201ENST00000428788 1096 ntBASIC12.81□□□□□ -0.36
LMO3Q8TAP4 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 RN7SL743P-201ENST00000475032 298 ntBASIC12.81□□□□□ -0.36
LMO3Q8TAP4 FPGT-205ENST00000482102 561 ntTSL 4 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 Z70280.1-201ENST00000490943 295 ntBASIC12.81□□□□□ -0.36
LMO3Q8TAP4 AC008040.3-201ENST00000493762 1232 ntBASIC12.81□□□□□ -0.36
LMO3Q8TAP4 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 CLDND1-223ENST00000511081 642 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 NUDT5-209ENST00000537776 1201 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 TJP2-209ENST00000539225 3838 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 AC012236.1-202ENST00000558388 1024 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 HNRNPA1P62-201ENST00000559372 952 ntBASIC12.81□□□□□ -0.36
LMO3Q8TAP4 AC005154.1-229ENST00000580440 791 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 MIR4725-201ENST00000581700 90 ntBASIC12.81□□□□□ -0.36
LMO3Q8TAP4 AP001793.1-201ENST00000584733 839 ntBASIC12.81□□□□□ -0.36
LMO3Q8TAP4 AFMID-205ENST00000586731 550 ntTSL 3 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 AFMID-210ENST00000589256 578 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 AC016590.1-203ENST00000590889 547 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 SMIM17-201ENST00000598409 1076 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 AC105105.4-201ENST00000610389 713 ntBASIC12.81□□□□□ -0.36
LMO3Q8TAP4 Metazoa_SRP.151-201ENST00000616313 273 ntBASIC12.81□□□□□ -0.36
LMO3Q8TAP4 AL512380.1-201ENST00000637411 2106 ntBASIC12.81□□□□□ -0.36
LMO3Q8TAP4 AC073264.4-201ENST00000638055 623 ntBASIC12.81□□□□□ -0.36
LMO3Q8TAP4 BAG6-235ENST00000362049 3626 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 UBIAD1-202ENST00000376810 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 PRKCQ-203ENST00000539722 3224 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 GBA-201ENST00000327247 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 SP100-203ENST00000409112 2198 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 TSPYL1-201ENST00000368608 3326 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 GBA-204ENST00000428024 1817 ntTSL 2 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 DBH-202ENST00000393056 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LMO3Q8TAP4 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 GPATCH2L-209ENST00000556663 2112 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 AC026469.1-201ENST00000621095 3306 ntBASIC12.8□□□□□ -0.36
LMO3Q8TAP4 TP53-218ENST00000610292 2639 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 USP14-202ENST00000383589 2168 ntTSL 5 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 RNF207-201ENST00000377939 3924 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 ERP29-201ENST00000261735 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 COPS7A-203ENST00000534877 1707 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 CCDC129-201ENST00000319386 4544 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 CENPO-206ENST00000473706 4272 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 AC005865.1-201ENST00000432994 3004 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 CCDC81-202ENST00000445632 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 PROKR2-201ENST00000217270 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 REG1B-201ENST00000305089 767 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 IGLV3-22-201ENST00000390307 409 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 KRTAP13-5P-201ENST00000418755 499 ntBASIC12.8□□□□□ -0.36
LMO3Q8TAP4 AL356056.2-202ENST00000430188 553 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 AC007128.2-201ENST00000435967 557 ntTSL 4 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 HYI-AS1-201ENST00000444386 545 ntTSL 2 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 AL450998.3-203ENST00000453804 645 ntTSL 3 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 VOPP1-212ENST00000454227 610 ntTSL 4 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 CLCN5-205ENST00000482218 449 ntTSL 3 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 AC022447.5-201ENST00000504817 392 ntBASIC12.8□□□□□ -0.36
LMO3Q8TAP4 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 TRAPPC4-209ENST00000528230 583 ntTSL 3 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 FP325317.1-201ENST00000539936 1042 ntBASIC12.8□□□□□ -0.36
LMO3Q8TAP4 COPZ1-206ENST00000549043 1232 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 AC087878.1-201ENST00000560709 574 ntTSL 4 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC12.8□□□□□ -0.36
LMO3Q8TAP4 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms