Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RN7SL313P-201ENST00000497618 288 ntBASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 AC091893.1-201ENST00000503772 399 ntBASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 AC003072.1-201ENST00000510957 612 ntBASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 GUSBP3-202ENST00000513408 1296 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 TRAPPC4-209ENST00000528230 583 ntTSL 3 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 AC023078.7-201ENST00000532712 961 ntBASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 AL352977.2-201ENST00000557101 547 ntTSL 4 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 AC068987.2-201ENST00000565518 896 ntBASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 AC015853.2-201ENST00000571282 493 ntTSL 4 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 NAA60-236ENST00000577013 575 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 PLA2G4C-AS1-203ENST00000601950 454 ntTSL 3 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 AC013472.3-201ENST00000607407 659 ntBASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 IFI27-212ENST00000618863 505 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 AC010335.3-201ENST00000623767 531 ntBASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 NSD3-202ENST00000317025 10776 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 GRAMD1B-203ENST00000456860 2805 ntTSL 2 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 LGALS3BP-201ENST00000262776 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 RECQL5-204ENST00000423245 3576 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 ZNF221-202ENST00000587682 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 ZNF37A-206ENST00000638053 4448 ntTSL 5 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 KATNAL2-202ENST00000356157 1635 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 AC018521.1-202ENST00000641877 2655 ntBASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 NFXL1-201ENST00000329043 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 TXNDC16-201ENST00000281741 4564 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 AL021408.2-201ENST00000624196 1544 ntBASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 CASP7-203ENST00000369318 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
NPIPA3F8WFD2 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
NPIPA3F8WFD2 DIDO1-205ENST00000370371 2833 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
NPIPA3F8WFD2 NUP93-220ENST00000569842 2834 ntTSL 5 BASIC11.08□□□□□ -0.63
NPIPA3F8WFD2 LBP-201ENST00000217407 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 SCNN1D-202ENST00000338555 3475 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 TROVE2-203ENST00000367444 1857 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 MFAP4-203ENST00000497081 1876 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 AGFG1-203ENST00000409171 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 LINC01934-205ENST00000435411 1771 ntTSL 5 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 DCAF11-203ENST00000396941 2402 ntTSL 2 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 ANKRD42-203ENST00000393392 2302 ntTSL 2 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 ZNF655-204ENST00000394163 4528 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 ANXA13-202ENST00000419625 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 PCYT1A-206ENST00000431016 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 AL078590.2-201ENST00000417483 1360 ntTSL 3 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 TEX35-203ENST00000367641 2377 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 NSA2-201ENST00000296802 1199 ntTSL 5 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 AL157414.1-201ENST00000366097 770 ntTSL 3 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 LINC01556-201ENST00000377186 466 ntTSL 2 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 NANOGNB-201ENST00000382119 907 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 RPL23-203ENST00000394332 625 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 RPP30-203ENST00000413330 1004 ntTSL 5 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 GPAT2P2-201ENST00000445404 863 ntBASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 AC118553.1-201ENST00000454219 655 ntTSL 2 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 RNF139-AS1-202ENST00000519861 359 ntTSL 3 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 ZNHIT1P1-201ENST00000523947 444 ntBASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 TPD52L1-206ENST00000524679 915 ntTSL 2 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 LINC02450-201ENST00000550177 1003 ntTSL 2 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 IGHV1OR16-2-201ENST00000564937 349 ntBASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 AC140658.2-201ENST00000566360 348 ntBASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 RPL23-207ENST00000577407 615 ntTSL 2 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 AC091588.2-201ENST00000578741 366 ntTSL 3 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 AC233702.8-201ENST00000579239 965 ntTSL 3 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 AD000671.1-201ENST00000591613 1037 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 EIF3K-213ENST00000593149 760 ntTSL 2 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 RPL37A-212ENST00000600880 425 ntTSL 2 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 DLG2-AS1_2.1-201ENST00000614607 218 ntBASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 VRK3-202ENST00000377011 1749 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 ARSG-202ENST00000452479 1733 ntTSL 5 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 WDR25-206ENST00000554998 1952 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 DAPK2-213ENST00000612884 8086 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 NDUFA5-211ENST00000611607 1504 ntTSL 2 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 ZNF772-209ENST00000615214 1506 ntTSL 5 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 IQSEC1-204ENST00000613206 3582 ntTSL 2 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 ARAP1-209ENST00000455638 2683 ntTSL 5 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 ZNF132-201ENST00000254166 3031 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 ALDH4A1-202ENST00000375341 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 HIPK1-AS1-204ENST00000450706 2117 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 PLAT-204ENST00000429710 1655 ntTSL 2 BASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 ADAM1B-201ENST00000454683 2000 ntBASIC11.08□□□□□ -0.64
NPIPA3F8WFD2 FUT10-211ENST00000524021 2042 ntTSL 2 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms