Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
MTHFRP42898 IFT74-201ENST00000380062 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MTHFRP42898 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.7□□□□□ -0.38
MTHFRP42898 DUSP22-211ENST00000604971 3824 ntTSL 2 BASIC12.7□□□□□ -0.38
MTHFRP42898 CRHR1-206ENST00000398285 2399 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MTHFRP42898 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC12.7□□□□□ -0.38
MTHFRP42898 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
MTHFRP42898 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
MTHFRP42898 OR10H1-202ENST00000641419 4376 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
MTHFRP42898 FKBP4P7-201ENST00000433874 1363 ntBASIC12.69□□□□□ -0.38
MTHFRP42898 LINC01686-201ENST00000566297 1376 ntBASIC12.69□□□□□ -0.38
MTHFRP42898 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.69□□□□□ -0.38
MTHFRP42898 CEACAM20-203ENST00000614924 1809 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
MTHFRP42898 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC12.69□□□□□ -0.38
MTHFRP42898 TRIM40-206ENST00000376724 2006 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
MTHFRP42898 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
MTHFRP42898 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
MTHFRP42898 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 AGAP6-203ENST00000618025 2690 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
MTHFRP42898 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC12.69□□□□□ -0.38
MTHFRP42898 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 IL12A-AS1-203ENST00000497452 2425 ntTSL 2 BASIC12.69□□□□□ -0.38
MTHFRP42898 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 PRR19-202ENST00000499536 1956 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
MTHFRP42898 ASB2-203ENST00000555019 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12.69□□□□□ -0.38
MTHFRP42898 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 AIMP2-201ENST00000223029 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 BCCIP-201ENST00000278100 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 NSA2-201ENST00000296802 1199 ntTSL 5 BASIC12.69□□□□□ -0.38
MTHFRP42898 OR9G1-201ENST00000312153 918 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
MTHFRP42898 RPL10A-201ENST00000322203 716 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 AC026461.4-201ENST00000379816 242 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 IGKV3D-20-201ENST00000390270 445 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
MTHFRP42898 CST13P-203ENST00000413633 1152 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 ADH5P2-201ENST00000425922 1124 ntBASIC12.69□□□□□ -0.38
MTHFRP42898 IDI2-AS1-203ENST00000434470 435 ntTSL 3 BASIC12.69□□□□□ -0.38
MTHFRP42898 SLC25A39P1-201ENST00000444461 1065 ntBASIC12.69□□□□□ -0.38
MTHFRP42898 AC099541.1-201ENST00000453828 670 ntTSL 2 BASIC12.69□□□□□ -0.38
MTHFRP42898 CYCSP8-201ENST00000455007 312 ntBASIC12.69□□□□□ -0.38
MTHFRP42898 IGKV3-20-201ENST00000492167 400 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
MTHFRP42898 RPL10P13-201ENST00000550757 303 ntBASIC12.69□□□□□ -0.38
MTHFRP42898 ARL1-209ENST00000551671 879 ntTSL 2 BASIC12.69□□□□□ -0.38
MTHFRP42898 PSMA4-219ENST00000560217 944 ntTSL 5 BASIC12.69□□□□□ -0.38
MTHFRP42898 ABCC6P1-202ENST00000565118 796 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 H3F3B-212ENST00000592643 795 ntTSL 3 BASIC12.69□□□□□ -0.38
MTHFRP42898 AL035420.3-201ENST00000619647 321 ntBASIC12.69□□□□□ -0.38
MTHFRP42898 AL627230.3-201ENST00000622239 192 ntBASIC12.69□□□□□ -0.38
MTHFRP42898 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
MTHFRP42898 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
MTHFRP42898 CCNB1IP1-206ENST00000437553 1686 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
MTHFRP42898 AC022113.1-201ENST00000499131 1674 ntTSL 2 BASIC12.69□□□□□ -0.38
MTHFRP42898 HOPX-211ENST00000554144 1672 ntTSL 5 BASIC12.69□□□□□ -0.38
MTHFRP42898 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 SARDH-204ENST00000371872 3344 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 PTCD1-201ENST00000292478 5582 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
MTHFRP42898 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
MTHFRP42898 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
MTHFRP42898 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 PTPN6-201ENST00000318974 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 MTERF2-207ENST00000552029 3235 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 ZNF318-201ENST00000361428 8006 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
MTHFRP42898 RCBTB2-206ENST00000544904 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
MTHFRP42898 KIAA1024L-201ENST00000564719 2354 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
MTHFRP42898 OR2A9P-202ENST00000479102 1990 ntBASIC12.69□□□□□ -0.38
MTHFRP42898 UBE2A-210ENST00000630695 1771 ntTSL 4 BASIC12.69□□□□□ -0.38
MTHFRP42898 ABCC4-207ENST00000629385 2903 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC12.68□□□□□ -0.38
MTHFRP42898 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
MTHFRP42898 CYP26B1-202ENST00000412253 4025 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 LINC01480-204ENST00000597199 1718 ntBASIC12.68□□□□□ -0.38
MTHFRP42898 YIPF1-202ENST00000371399 1503 ntTSL 2 BASIC12.68□□□□□ -0.38
MTHFRP42898 MYO1C-201ENST00000359786 5145 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 MYCNOS-202ENST00000641263 1313 ntBASIC12.68□□□□□ -0.38
MTHFRP42898 ENTPD3-203ENST00000445129 1658 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 LINC01106-201ENST00000436665 2244 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 MATR3-233ENST00000504203 2243 ntTSL 2 BASIC12.68□□□□□ -0.38
MTHFRP42898 PLK4-209ENST00000513090 3123 ntTSL 2 BASIC12.68□□□□□ -0.38
MTHFRP42898 RABGAP1L-207ENST00000367690 1815 ntTSL 2 BASIC12.68□□□□□ -0.38
MTHFRP42898 SPANXA2-201ENST00000370518 691 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 SPANXA1-201ENST00000370519 691 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
MTHFRP42898 AC007249.1-201ENST00000404616 494 ntTSL 5 BASIC12.68□□□□□ -0.38
MTHFRP42898 ITPKB-IT1-201ENST00000412918 746 ntTSL 2 BASIC12.68□□□□□ -0.38
MTHFRP42898 DAPK1-IT1-201ENST00000431813 702 ntTSL 3 BASIC12.68□□□□□ -0.38
MTHFRP42898 AL590302.2-201ENST00000435810 1122 ntTSL 5 BASIC12.68□□□□□ -0.38
MTHFRP42898 LINC01366-201ENST00000436248 983 ntTSL 3 BASIC12.68□□□□□ -0.38
MTHFRP42898 CD79A-202ENST00000444740 567 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms