Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC084855.2-201ENST00000559400 2393 ntTSL 2 BASIC11.09□□□□□ -0.63
P04436 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 ACSL6-207ENST00000379264 6539 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
P04436 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
P04436 TNRC6C-201ENST00000301624 9632 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
P04436 PER1-211ENST00000581082 4521 ntTSL 5 BASIC11.08□□□□□ -0.63
P04436 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
P04436 AP005242.4-201ENST00000623533 2529 ntBASIC11.08□□□□□ -0.64
P04436 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
P04436 PTGS1-201ENST00000223423 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 TLE3-213ENST00000558379 2304 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC11.08□□□□□ -0.64
P04436 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 AC007614.5-201ENST00000623424 8892 ntBASIC11.08□□□□□ -0.64
P04436 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 TP53-206ENST00000455263 2580 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 TP53-219ENST00000610538 2580 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 FGF5-203ENST00000456523 5234 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 CASP7-203ENST00000369318 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 CHCHD5-201ENST00000324913 691 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 C10orf99-201ENST00000372126 888 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 AL021068.1-201ENST00000392097 911 ntBASIC11.08□□□□□ -0.64
P04436 ACTG1P12-201ENST00000423183 1166 ntBASIC11.08□□□□□ -0.64
P04436 AC013436.1-201ENST00000425077 422 ntTSL 3 BASIC11.08□□□□□ -0.64
P04436 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC11.08□□□□□ -0.64
P04436 TIMM23B-202ENST00000451577 1152 ntTSL 2 BASIC11.08□□□□□ -0.64
P04436 AC005011.1-201ENST00000455206 210 ntBASIC11.08□□□□□ -0.64
P04436 RN7SL846P-201ENST00000467429 292 ntBASIC11.08□□□□□ -0.64
P04436 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC11.08□□□□□ -0.64
P04436 KRT19P3-201ENST00000507547 828 ntBASIC11.08□□□□□ -0.64
P04436 AP000911.1-205ENST00000527712 594 ntTSL 4 BASIC11.08□□□□□ -0.64
P04436 RAD52-212ENST00000541619 560 ntTSL 4 BASIC11.08□□□□□ -0.64
P04436 OR13C2-201ENST00000542196 957 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
P04436 AL158801.2-201ENST00000554650 554 ntTSL 3 BASIC11.08□□□□□ -0.64
P04436 MAX-216ENST00000556979 615 ntTSL 3 BASIC11.08□□□□□ -0.64
P04436 AC009065.7-201ENST00000561544 580 ntTSL 3 BASIC11.08□□□□□ -0.64
P04436 PMM2-216ENST00000569958 698 ntTSL 2 BASIC11.08□□□□□ -0.64
P04436 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
P04436 SNRPD1-204ENST00000582475 723 ntTSL 3 BASIC11.08□□□□□ -0.64
P04436 AKR1B1P7-201ENST00000587229 952 ntBASIC11.08□□□□□ -0.64
P04436 RN7SL238P-201ENST00000613832 290 ntBASIC11.08□□□□□ -0.64
P04436 PSME2-217ENST00000615264 874 ntTSL 5 BASIC11.08□□□□□ -0.64
P04436 Metazoa_SRP.139-201ENST00000616096 290 ntBASIC11.08□□□□□ -0.64
P04436 RN7SL106P-201ENST00000618104 290 ntBASIC11.08□□□□□ -0.64
P04436 AL512324.3-201ENST00000619383 882 ntBASIC11.08□□□□□ -0.64
P04436 PSME2-218ENST00000630027 185 ntTSL 3 BASIC11.08□□□□□ -0.64
P04436 AC233280.19-201ENST00000633223 136 ntBASIC11.08□□□□□ -0.64
P04436 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
P04436 AC080013.1-204ENST00000607426 2185 ntBASIC11.08□□□□□ -0.64
P04436 LINC01134-203ENST00000442673 3059 ntTSL 2 BASIC11.08□□□□□ -0.64
P04436 ATP8B2-202ENST00000368489 5861 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC11.08□□□□□ -0.64
P04436 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC11.08□□□□□ -0.64
P04436 EDAR-201ENST00000258443 4214 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 TEX13D-201ENST00000632372 4203 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
P04436 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
P04436 JRKL-201ENST00000332349 2855 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
P04436 LINC00242-201ENST00000437615 2418 ntTSL 2 BASIC11.08□□□□□ -0.64
P04436 POC5-213ENST00000514838 1984 ntTSL 5 BASIC11.08□□□□□ -0.64
P04436 ANXA8-205ENST00000585281 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 NLRC5-203ENST00000436936 6724 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
P04436 OSBPL9-207ENST00000462759 2755 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 RNF170-203ENST00000319104 1866 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 PNPO-217ENST00000642017 3465 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
P04436 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
P04436 COL9A1-202ENST00000357250 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 CCNB1IP1-206ENST00000437553 1686 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
P04436 JPX-207ENST00000602772 1692 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
P04436 RHBDL3-203ENST00000536287 4470 ntTSL 2 BASIC11.07□□□□□ -0.64
P04436 SLC44A1-201ENST00000374720 10511 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04436 DCT-201ENST00000377028 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04436 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC11.07□□□□□ -0.64
P04436 C12orf74-202ENST00000544406 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04436 AL050303.4-201ENST00000624520 1839 ntBASIC11.07□□□□□ -0.64
P04436 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC11.07□□□□□ -0.64
P04436 ANKRD30BP2-202ENST00000447861 3260 ntTSL 2 BASIC11.07□□□□□ -0.64
P04436 FO681491.1-201ENST00000623586 3260 ntTSL 2 BASIC11.07□□□□□ -0.64
P04436 IKZF1-201ENST00000331340 6189 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04436 TNFAIP3-211ENST00000621150 1613 ntTSL 5 BASIC11.07□□□□□ -0.64
P04436 EZR-201ENST00000337147 3068 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
P04436 RN7SKP245-201ENST00000364025 320 ntBASIC11.07□□□□□ -0.64
P04436 GNAS-209ENST00000371081 730 ntTSL 2 BASIC11.07□□□□□ -0.64
P04436 HIST1H4C-201ENST00000377803 435 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
P04436 IGHV7-81-201ENST00000390639 405 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
P04436 THUMPD1P1-201ENST00000400014 1041 ntBASIC11.07□□□□□ -0.64
P04436 AC093690.1-201ENST00000418963 2110 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
P04436 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
P04436 APOBEC3H-203ENST00000421988 592 ntTSL 5 BASIC11.07□□□□□ -0.64
P04436 RN7SL728P-201ENST00000464718 300 ntBASIC11.07□□□□□ -0.64
P04436 B3GALT5-AS1-204ENST00000489821 1159 ntTSL 2 BASIC11.07□□□□□ -0.64
P04436 GM2AP1-201ENST00000491450 521 ntBASIC11.07□□□□□ -0.64
P04436 PSCA-204ENST00000513264 551 ntAPPRIS ALT2 TSL 4 BASIC11.07□□□□□ -0.64
P04436 CSRP1-219ENST00000533432 1149 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
P04436 AC140847.2-201ENST00000545923 501 ntTSL 3 BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms