Protein–RNA interactions for Protein: Q9Y5X3

SNX5, Sorting nexin-5, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5Q9Y5X3 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX5Q9Y5X3 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX5Q9Y5X3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.92■□□□□ 0.78
SNX5Q9Y5X3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SNX5Q9Y5X3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNX5Q9Y5X3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX5Q9Y5X3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNX5Q9Y5X3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SNX5Q9Y5X3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNX5Q9Y5X3 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.91■□□□□ 0.78
SNX5Q9Y5X3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX5Q9Y5X3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SNX5Q9Y5X3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX5Q9Y5X3 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SNX5Q9Y5X3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX5Q9Y5X3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX5Q9Y5X3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX5Q9Y5X3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SNX5Q9Y5X3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX5Q9Y5X3 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX5Q9Y5X3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SNX5Q9Y5X3 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX5Q9Y5X3 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX5Q9Y5X3 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC19.9■□□□□ 0.78
SNX5Q9Y5X3 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.9■□□□□ 0.78
SNX5Q9Y5X3 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SNX5Q9Y5X3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
SNX5Q9Y5X3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.9■□□□□ 0.78
SNX5Q9Y5X3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
SNX5Q9Y5X3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.9■□□□□ 0.78
SNX5Q9Y5X3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.9■□□□□ 0.78
SNX5Q9Y5X3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SNX5Q9Y5X3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
SNX5Q9Y5X3 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX5Q9Y5X3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX5Q9Y5X3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX5Q9Y5X3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNX5Q9Y5X3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX5Q9Y5X3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX5Q9Y5X3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.89■□□□□ 0.77
SNX5Q9Y5X3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.89■□□□□ 0.77
SNX5Q9Y5X3 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.89■□□□□ 0.77
SNX5Q9Y5X3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNX5Q9Y5X3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
SNX5Q9Y5X3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.89■□□□□ 0.77
SNX5Q9Y5X3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX5Q9Y5X3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SNX5Q9Y5X3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
SNX5Q9Y5X3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
SNX5Q9Y5X3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX5Q9Y5X3 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX5Q9Y5X3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX5Q9Y5X3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX5Q9Y5X3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SNX5Q9Y5X3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNX5Q9Y5X3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX5Q9Y5X3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX5Q9Y5X3 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SNX5Q9Y5X3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
SNX5Q9Y5X3 RNF165-205ENST00000588679 2904 ntBASIC19.88■□□□□ 0.77
SNX5Q9Y5X3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX5Q9Y5X3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
SNX5Q9Y5X3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX5Q9Y5X3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX5Q9Y5X3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX5Q9Y5X3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX5Q9Y5X3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX5Q9Y5X3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNX5Q9Y5X3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNX5Q9Y5X3 DUX4L18-201ENST00000553347 1267 ntBASIC19.87■□□□□ 0.77
SNX5Q9Y5X3 ABHD17AP5-201ENST00000580133 923 ntBASIC19.87■□□□□ 0.77
SNX5Q9Y5X3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNX5Q9Y5X3 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.87■□□□□ 0.77
SNX5Q9Y5X3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX5Q9Y5X3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX5Q9Y5X3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SNX5Q9Y5X3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SNX5Q9Y5X3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX5Q9Y5X3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SNX5Q9Y5X3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX5Q9Y5X3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SNX5Q9Y5X3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX5Q9Y5X3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX5Q9Y5X3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX5Q9Y5X3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.86■□□□□ 0.77
SNX5Q9Y5X3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX5Q9Y5X3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX5Q9Y5X3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SNX5Q9Y5X3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX5Q9Y5X3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX5Q9Y5X3 NTF6A-201ENST00000591175 560 ntBASIC19.86■□□□□ 0.77
SNX5Q9Y5X3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX5Q9Y5X3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
SNX5Q9Y5X3 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX5Q9Y5X3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX5Q9Y5X3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.86■□□□□ 0.77
SNX5Q9Y5X3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX5Q9Y5X3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.85■□□□□ 0.77
SNX5Q9Y5X3 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.85■□□□□ 0.77
SNX5Q9Y5X3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms