Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGB1Q9Y5G3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHGB1Q9Y5G3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHGB1Q9Y5G3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGB1Q9Y5G3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.72■□□□□ 0.75
PCDHGB1Q9Y5G3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGB1Q9Y5G3 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGB1Q9Y5G3 AC010980.1-201ENST00000587192 1142 ntBASIC19.72■□□□□ 0.75
PCDHGB1Q9Y5G3 AC074183.2-201ENST00000623112 922 ntBASIC19.72■□□□□ 0.75
PCDHGB1Q9Y5G3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGB1Q9Y5G3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHGB1Q9Y5G3 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGB1Q9Y5G3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHGB1Q9Y5G3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGB1Q9Y5G3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGB1Q9Y5G3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.71■□□□□ 0.75
PCDHGB1Q9Y5G3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGB1Q9Y5G3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGB1Q9Y5G3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGB1Q9Y5G3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHGB1Q9Y5G3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PCDHGB1Q9Y5G3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGB1Q9Y5G3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PCDHGB1Q9Y5G3 AF106564.1-201ENST00000607058 2553 ntBASIC19.7■□□□□ 0.74
PCDHGB1Q9Y5G3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGB1Q9Y5G3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
PCDHGB1Q9Y5G3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PCDHGB1Q9Y5G3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.7■□□□□ 0.74
PCDHGB1Q9Y5G3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.7■□□□□ 0.74
PCDHGB1Q9Y5G3 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
PCDHGB1Q9Y5G3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGB1Q9Y5G3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHGB1Q9Y5G3 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGB1Q9Y5G3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGB1Q9Y5G3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PCDHGB1Q9Y5G3 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.7■□□□□ 0.74
PCDHGB1Q9Y5G3 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHGB1Q9Y5G3 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.7■□□□□ 0.74
PCDHGB1Q9Y5G3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PCDHGB1Q9Y5G3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGB1Q9Y5G3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PCDHGB1Q9Y5G3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGB1Q9Y5G3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGB1Q9Y5G3 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.69■□□□□ 0.74
PCDHGB1Q9Y5G3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGB1Q9Y5G3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGB1Q9Y5G3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PCDHGB1Q9Y5G3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PCDHGB1Q9Y5G3 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGB1Q9Y5G3 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGB1Q9Y5G3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PCDHGB1Q9Y5G3 AC007952.6-201ENST00000573168 2673 ntBASIC19.69■□□□□ 0.74
PCDHGB1Q9Y5G3 AC003957.1-201ENST00000625108 2673 ntBASIC19.69■□□□□ 0.74
PCDHGB1Q9Y5G3 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB1Q9Y5G3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB1Q9Y5G3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
PCDHGB1Q9Y5G3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB1Q9Y5G3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.68■□□□□ 0.74
PCDHGB1Q9Y5G3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB1Q9Y5G3 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB1Q9Y5G3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHGB1Q9Y5G3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB1Q9Y5G3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB1Q9Y5G3 AC009299.2-201ENST00000482477 511 ntBASIC19.68■□□□□ 0.74
PCDHGB1Q9Y5G3 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.68■□□□□ 0.74
PCDHGB1Q9Y5G3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.68■□□□□ 0.74
PCDHGB1Q9Y5G3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB1Q9Y5G3 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB1Q9Y5G3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PCDHGB1Q9Y5G3 FP325331.1-202ENST00000623531 1380 ntBASIC19.68■□□□□ 0.74
PCDHGB1Q9Y5G3 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
PCDHGB1Q9Y5G3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
PCDHGB1Q9Y5G3 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
PCDHGB1Q9Y5G3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB1Q9Y5G3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDHGB1Q9Y5G3 LINC01529-204ENST00000636474 1715 ntBASIC19.66■□□□□ 0.74
PCDHGB1Q9Y5G3 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDHGB1Q9Y5G3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms