Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.77■■□□□ 1.56
PCDHA4Q9UN74 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC24.77■■□□□ 1.56
PCDHA4Q9UN74 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA4Q9UN74 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA4Q9UN74 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
PCDHA4Q9UN74 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
PCDHA4Q9UN74 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA4Q9UN74 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA4Q9UN74 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.76■■□□□ 1.55
PCDHA4Q9UN74 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
PCDHA4Q9UN74 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA4Q9UN74 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
PCDHA4Q9UN74 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA4Q9UN74 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA4Q9UN74 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
PCDHA4Q9UN74 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC24.76■■□□□ 1.55
PCDHA4Q9UN74 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
PCDHA4Q9UN74 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDHA4Q9UN74 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDHA4Q9UN74 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA4Q9UN74 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA4Q9UN74 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA4Q9UN74 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA4Q9UN74 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.75■■□□□ 1.55
PCDHA4Q9UN74 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.75■■□□□ 1.55
PCDHA4Q9UN74 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDHA4Q9UN74 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDHA4Q9UN74 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
PCDHA4Q9UN74 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA4Q9UN74 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA4Q9UN74 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDHA4Q9UN74 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC24.75■■□□□ 1.55
PCDHA4Q9UN74 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
PCDHA4Q9UN74 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA4Q9UN74 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.74■■□□□ 1.55
PCDHA4Q9UN74 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA4Q9UN74 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.74■■□□□ 1.55
PCDHA4Q9UN74 AC012414.1-201ENST00000556676 535 ntBASIC24.74■■□□□ 1.55
PCDHA4Q9UN74 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.74■■□□□ 1.55
PCDHA4Q9UN74 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24.74■■□□□ 1.55
PCDHA4Q9UN74 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
PCDHA4Q9UN74 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA4Q9UN74 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
PCDHA4Q9UN74 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHA4Q9UN74 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHA4Q9UN74 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.73■■□□□ 1.55
PCDHA4Q9UN74 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHA4Q9UN74 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC24.73■■□□□ 1.55
PCDHA4Q9UN74 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHA4Q9UN74 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24.73■■□□□ 1.55
PCDHA4Q9UN74 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.73■■□□□ 1.55
PCDHA4Q9UN74 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
PCDHA4Q9UN74 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
PCDHA4Q9UN74 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.73■■□□□ 1.55
PCDHA4Q9UN74 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC24.73■■□□□ 1.55
PCDHA4Q9UN74 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC24.73■■□□□ 1.55
PCDHA4Q9UN74 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC24.73■■□□□ 1.55
PCDHA4Q9UN74 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.73■■□□□ 1.55
PCDHA4Q9UN74 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
PCDHA4Q9UN74 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA4Q9UN74 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA4Q9UN74 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
PCDHA4Q9UN74 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA4Q9UN74 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA4Q9UN74 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA4Q9UN74 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
PCDHA4Q9UN74 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA4Q9UN74 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA4Q9UN74 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC24.72■■□□□ 1.55
PCDHA4Q9UN74 AL354811.1-201ENST00000610286 706 ntBASIC24.72■■□□□ 1.55
PCDHA4Q9UN74 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDHA4Q9UN74 AL358852.1-201ENST00000623174 1268 ntBASIC24.72■■□□□ 1.55
PCDHA4Q9UN74 ASL-203ENST00000380839 1765 ntTSL 5 BASIC24.72■■□□□ 1.55
PCDHA4Q9UN74 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA4Q9UN74 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC24.72■■□□□ 1.55
PCDHA4Q9UN74 AP004607.7-201ENST00000527152 1677 ntBASIC24.72■■□□□ 1.55
PCDHA4Q9UN74 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
PCDHA4Q9UN74 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.71■■□□□ 1.55
PCDHA4Q9UN74 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC24.71■■□□□ 1.55
PCDHA4Q9UN74 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA4Q9UN74 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA4Q9UN74 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA4Q9UN74 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHA4Q9UN74 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC24.7■■□□□ 1.55
PCDHA4Q9UN74 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDHA4Q9UN74 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDHA4Q9UN74 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHA4Q9UN74 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHA4Q9UN74 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDHA4Q9UN74 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHA4Q9UN74 GUK1-205ENST00000366722 850 ntTSL 3 BASIC24.7■■□□□ 1.54
PCDHA4Q9UN74 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHA4Q9UN74 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.7■■□□□ 1.54
PCDHA4Q9UN74 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.7■■□□□ 1.54
PCDHA4Q9UN74 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC24.7■■□□□ 1.54
PCDHA4Q9UN74 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHA4Q9UN74 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA4Q9UN74 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA4Q9UN74 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHA4Q9UN74 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.69■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms