Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
DDX41Q9UJV9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC24.82■■□□□ 1.56
DDX41Q9UJV9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.82■■□□□ 1.56
DDX41Q9UJV9 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
DDX41Q9UJV9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.81■■□□□ 1.56
DDX41Q9UJV9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
DDX41Q9UJV9 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC24.81■■□□□ 1.56
DDX41Q9UJV9 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
DDX41Q9UJV9 AC137767.1-201ENST00000602918 1920 ntBASIC24.81■■□□□ 1.56
DDX41Q9UJV9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
DDX41Q9UJV9 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.81■■□□□ 1.56
DDX41Q9UJV9 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.81■■□□□ 1.56
DDX41Q9UJV9 AC068587.7-201ENST00000641602 218 ntBASIC24.81■■□□□ 1.56
DDX41Q9UJV9 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
DDX41Q9UJV9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
DDX41Q9UJV9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
DDX41Q9UJV9 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
DDX41Q9UJV9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
DDX41Q9UJV9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
DDX41Q9UJV9 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
DDX41Q9UJV9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.8■■□□□ 1.56
DDX41Q9UJV9 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
DDX41Q9UJV9 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.8■■□□□ 1.56
DDX41Q9UJV9 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
DDX41Q9UJV9 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
DDX41Q9UJV9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
DDX41Q9UJV9 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
DDX41Q9UJV9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC24.8■■□□□ 1.56
DDX41Q9UJV9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
DDX41Q9UJV9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
DDX41Q9UJV9 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC24.79■■□□□ 1.56
DDX41Q9UJV9 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.79■■□□□ 1.56
DDX41Q9UJV9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
DDX41Q9UJV9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
DDX41Q9UJV9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
DDX41Q9UJV9 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.79■■□□□ 1.56
DDX41Q9UJV9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.79■■□□□ 1.56
DDX41Q9UJV9 AC092437.1-201ENST00000624794 1048 ntBASIC24.79■■□□□ 1.56
DDX41Q9UJV9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
DDX41Q9UJV9 AC007375.3-201ENST00000600936 2314 ntBASIC24.79■■□□□ 1.56
DDX41Q9UJV9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
DDX41Q9UJV9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
DDX41Q9UJV9 NTF6G-201ENST00000591094 616 ntBASIC24.78■■□□□ 1.56
DDX41Q9UJV9 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
DDX41Q9UJV9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
DDX41Q9UJV9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
DDX41Q9UJV9 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
DDX41Q9UJV9 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
DDX41Q9UJV9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.77■■□□□ 1.56
DDX41Q9UJV9 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.77■■□□□ 1.56
DDX41Q9UJV9 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.77■■□□□ 1.56
DDX41Q9UJV9 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.77■■□□□ 1.56
DDX41Q9UJV9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
DDX41Q9UJV9 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.77■■□□□ 1.56
DDX41Q9UJV9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
DDX41Q9UJV9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
DDX41Q9UJV9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC24.77■■□□□ 1.56
DDX41Q9UJV9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.77■■□□□ 1.56
DDX41Q9UJV9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
DDX41Q9UJV9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
DDX41Q9UJV9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
DDX41Q9UJV9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
DDX41Q9UJV9 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
DDX41Q9UJV9 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.76■■□□□ 1.55
DDX41Q9UJV9 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
DDX41Q9UJV9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.76■■□□□ 1.55
DDX41Q9UJV9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
DDX41Q9UJV9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
DDX41Q9UJV9 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
DDX41Q9UJV9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.76■■□□□ 1.55
DDX41Q9UJV9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC24.76■■□□□ 1.55
DDX41Q9UJV9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC24.76■■□□□ 1.55
DDX41Q9UJV9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
DDX41Q9UJV9 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.75■■□□□ 1.55
DDX41Q9UJV9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
DDX41Q9UJV9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.75■■□□□ 1.55
DDX41Q9UJV9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC24.75■■□□□ 1.55
DDX41Q9UJV9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.75■■□□□ 1.55
DDX41Q9UJV9 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC24.75■■□□□ 1.55
DDX41Q9UJV9 AL137784.2-201ENST00000607332 1000 ntBASIC24.75■■□□□ 1.55
DDX41Q9UJV9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.75■■□□□ 1.55
DDX41Q9UJV9 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
DDX41Q9UJV9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
DDX41Q9UJV9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
DDX41Q9UJV9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC24.75■■□□□ 1.55
DDX41Q9UJV9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
DDX41Q9UJV9 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.75■■□□□ 1.55
DDX41Q9UJV9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.74■■□□□ 1.55
DDX41Q9UJV9 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
DDX41Q9UJV9 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
DDX41Q9UJV9 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.74■■□□□ 1.55
DDX41Q9UJV9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC24.74■■□□□ 1.55
DDX41Q9UJV9 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
DDX41Q9UJV9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
DDX41Q9UJV9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
DDX41Q9UJV9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
DDX41Q9UJV9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
DDX41Q9UJV9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
DDX41Q9UJV9 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.74■■□□□ 1.55
DDX41Q9UJV9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms