Protein–RNA interactions for Protein: Q9UJJ7

RPUSD1, RNA pseudouridylate synthase domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD1Q9UJJ7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RPUSD1Q9UJJ7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
RPUSD1Q9UJJ7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPUSD1Q9UJJ7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPUSD1Q9UJJ7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.94■□□□□ 0.46
RPUSD1Q9UJJ7 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPUSD1Q9UJJ7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.94■□□□□ 0.46
RPUSD1Q9UJJ7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.94■□□□□ 0.46
RPUSD1Q9UJJ7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RPUSD1Q9UJJ7 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RPUSD1Q9UJJ7 LINC00526-201ENST00000581067 1875 ntBASIC17.94■□□□□ 0.46
RPUSD1Q9UJJ7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RPUSD1Q9UJJ7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RPUSD1Q9UJJ7 AC137767.1-201ENST00000602918 1920 ntBASIC17.94■□□□□ 0.46
RPUSD1Q9UJJ7 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RPUSD1Q9UJJ7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 AC027612.3-201ENST00000413684 1047 ntBASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 AC079089.2-201ENST00000531211 1277 ntBASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 RARRES2P6-201ENST00000567333 442 ntBASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 SMUG1P1-201ENST00000590640 811 ntBASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 MIR6084-201ENST00000622012 110 ntBASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RPUSD1Q9UJJ7 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.92■□□□□ 0.46
RPUSD1Q9UJJ7 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.92■□□□□ 0.46
RPUSD1Q9UJJ7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPUSD1Q9UJJ7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPUSD1Q9UJJ7 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPUSD1Q9UJJ7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPUSD1Q9UJJ7 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPUSD1Q9UJJ7 AC139530.1-201ENST00000575312 1977 ntBASIC17.92■□□□□ 0.46
RPUSD1Q9UJJ7 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPUSD1Q9UJJ7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.92■□□□□ 0.46
RPUSD1Q9UJJ7 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RPUSD1Q9UJJ7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPUSD1Q9UJJ7 EP400NL-214ENST00000641289 2402 ntBASIC17.92■□□□□ 0.46
RPUSD1Q9UJJ7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPUSD1Q9UJJ7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.92■□□□□ 0.46
RPUSD1Q9UJJ7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RPUSD1Q9UJJ7 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPUSD1Q9UJJ7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPUSD1Q9UJJ7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RPUSD1Q9UJJ7 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPUSD1Q9UJJ7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPUSD1Q9UJJ7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RPUSD1Q9UJJ7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPUSD1Q9UJJ7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
RPUSD1Q9UJJ7 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPUSD1Q9UJJ7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPUSD1Q9UJJ7 AC026271.2-201ENST00000428091 497 ntBASIC17.91■□□□□ 0.46
RPUSD1Q9UJJ7 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPUSD1Q9UJJ7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPUSD1Q9UJJ7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.91■□□□□ 0.46
RPUSD1Q9UJJ7 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.91■□□□□ 0.46
RPUSD1Q9UJJ7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
RPUSD1Q9UJJ7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RPUSD1Q9UJJ7 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RPUSD1Q9UJJ7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.91■□□□□ 0.46
RPUSD1Q9UJJ7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPUSD1Q9UJJ7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPUSD1Q9UJJ7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.9■□□□□ 0.46
RPUSD1Q9UJJ7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPUSD1Q9UJJ7 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPUSD1Q9UJJ7 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.9■□□□□ 0.46
RPUSD1Q9UJJ7 AC097381.1-201ENST00000429019 1296 ntBASIC17.9■□□□□ 0.46
RPUSD1Q9UJJ7 YBX1P1-201ENST00000445822 960 ntBASIC17.9■□□□□ 0.46
RPUSD1Q9UJJ7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.9■□□□□ 0.46
RPUSD1Q9UJJ7 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPUSD1Q9UJJ7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.9■□□□□ 0.46
RPUSD1Q9UJJ7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
RPUSD1Q9UJJ7 MIR6821-201ENST00000617625 74 ntBASIC17.9■□□□□ 0.46
RPUSD1Q9UJJ7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.9■□□□□ 0.46
RPUSD1Q9UJJ7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPUSD1Q9UJJ7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RPUSD1Q9UJJ7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RPUSD1Q9UJJ7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.9■□□□□ 0.46
RPUSD1Q9UJJ7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.9■□□□□ 0.46
RPUSD1Q9UJJ7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RPUSD1Q9UJJ7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RPUSD1Q9UJJ7 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
RPUSD1Q9UJJ7 AC092053.2-201ENST00000640557 1818 ntBASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms