Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.83■□□□□ 0.76
LRFN1Q9P244 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.83■□□□□ 0.76
LRFN1Q9P244 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRFN1Q9P244 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LRFN1Q9P244 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.83■□□□□ 0.76
LRFN1Q9P244 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LRFN1Q9P244 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRFN1Q9P244 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRFN1Q9P244 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.82■□□□□ 0.76
LRFN1Q9P244 AC005224.4-201ENST00000583262 1652 ntBASIC19.82■□□□□ 0.76
LRFN1Q9P244 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRFN1Q9P244 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRFN1Q9P244 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRFN1Q9P244 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.82■□□□□ 0.76
LRFN1Q9P244 AC137761.2-201ENST00000561729 223 ntBASIC19.82■□□□□ 0.76
LRFN1Q9P244 AC145350.3-201ENST00000569033 163 ntBASIC19.82■□□□□ 0.76
LRFN1Q9P244 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRFN1Q9P244 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRFN1Q9P244 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRFN1Q9P244 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRFN1Q9P244 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.82■□□□□ 0.76
LRFN1Q9P244 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRFN1Q9P244 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.82■□□□□ 0.76
LRFN1Q9P244 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRFN1Q9P244 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRFN1Q9P244 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.81■□□□□ 0.76
LRFN1Q9P244 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
LRFN1Q9P244 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.81■□□□□ 0.76
LRFN1Q9P244 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRFN1Q9P244 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.81■□□□□ 0.76
LRFN1Q9P244 KRT19P1-201ENST00000405746 1186 ntBASIC19.81■□□□□ 0.76
LRFN1Q9P244 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRFN1Q9P244 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRFN1Q9P244 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.81■□□□□ 0.76
LRFN1Q9P244 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.81■□□□□ 0.76
LRFN1Q9P244 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.81■□□□□ 0.76
LRFN1Q9P244 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.81■□□□□ 0.76
LRFN1Q9P244 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.81■□□□□ 0.76
LRFN1Q9P244 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRFN1Q9P244 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRFN1Q9P244 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRFN1Q9P244 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.81■□□□□ 0.76
LRFN1Q9P244 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRFN1Q9P244 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
LRFN1Q9P244 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRFN1Q9P244 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRFN1Q9P244 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRFN1Q9P244 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRFN1Q9P244 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRFN1Q9P244 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRFN1Q9P244 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRFN1Q9P244 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
LRFN1Q9P244 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRFN1Q9P244 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.79■□□□□ 0.76
LRFN1Q9P244 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.79■□□□□ 0.76
LRFN1Q9P244 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRFN1Q9P244 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRFN1Q9P244 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRFN1Q9P244 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LRFN1Q9P244 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.79■□□□□ 0.76
LRFN1Q9P244 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.79■□□□□ 0.76
LRFN1Q9P244 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.79■□□□□ 0.76
LRFN1Q9P244 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRFN1Q9P244 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRFN1Q9P244 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRFN1Q9P244 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRFN1Q9P244 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRFN1Q9P244 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.78■□□□□ 0.76
LRFN1Q9P244 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.78■□□□□ 0.76
LRFN1Q9P244 OR7E47P-201ENST00000546390 1422 ntBASIC19.78■□□□□ 0.76
LRFN1Q9P244 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRFN1Q9P244 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LRFN1Q9P244 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.78■□□□□ 0.76
LRFN1Q9P244 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRFN1Q9P244 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.78■□□□□ 0.76
LRFN1Q9P244 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.78■□□□□ 0.76
LRFN1Q9P244 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.78■□□□□ 0.76
LRFN1Q9P244 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.78■□□□□ 0.76
LRFN1Q9P244 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.78■□□□□ 0.76
LRFN1Q9P244 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRFN1Q9P244 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
LRFN1Q9P244 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.78■□□□□ 0.76
LRFN1Q9P244 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
LRFN1Q9P244 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
LRFN1Q9P244 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.78■□□□□ 0.76
LRFN1Q9P244 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRFN1Q9P244 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.78■□□□□ 0.76
LRFN1Q9P244 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRFN1Q9P244 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LRFN1Q9P244 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRFN1Q9P244 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRFN1Q9P244 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
LRFN1Q9P244 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.77■□□□□ 0.76
LRFN1Q9P244 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LRFN1Q9P244 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LRFN1Q9P244 AC006015.1-201ENST00000429970 570 ntBASIC19.77■□□□□ 0.76
LRFN1Q9P244 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.77■□□□□ 0.76
LRFN1Q9P244 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
LRFN1Q9P244 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
LRFN1Q9P244 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms