Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CISHQ9NSE2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CISHQ9NSE2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CISHQ9NSE2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CISHQ9NSE2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CISHQ9NSE2 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
CISHQ9NSE2 AC105233.4-201ENST00000642045 216 ntBASIC23.1■■□□□ 1.29
CISHQ9NSE2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.1■■□□□ 1.29
CISHQ9NSE2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CISHQ9NSE2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CISHQ9NSE2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.1■■□□□ 1.29
CISHQ9NSE2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CISHQ9NSE2 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CISHQ9NSE2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CISHQ9NSE2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.09■■□□□ 1.29
CISHQ9NSE2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CISHQ9NSE2 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CISHQ9NSE2 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CISHQ9NSE2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
CISHQ9NSE2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC23.09■■□□□ 1.29
CISHQ9NSE2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC23.09■■□□□ 1.29
CISHQ9NSE2 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.09■■□□□ 1.29
CISHQ9NSE2 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CISHQ9NSE2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CISHQ9NSE2 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CISHQ9NSE2 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CISHQ9NSE2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CISHQ9NSE2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CISHQ9NSE2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CISHQ9NSE2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CISHQ9NSE2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
CISHQ9NSE2 IRS3P-201ENST00000223076 1006 ntBASIC23.08■■□□□ 1.29
CISHQ9NSE2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.29
CISHQ9NSE2 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CISHQ9NSE2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CISHQ9NSE2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CISHQ9NSE2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CISHQ9NSE2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.08■■□□□ 1.29
CISHQ9NSE2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.08■■□□□ 1.29
CISHQ9NSE2 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CISHQ9NSE2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
CISHQ9NSE2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CISHQ9NSE2 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CISHQ9NSE2 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CISHQ9NSE2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
CISHQ9NSE2 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC23.07■■□□□ 1.28
CISHQ9NSE2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CISHQ9NSE2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CISHQ9NSE2 ZNRF2P3-201ENST00000424200 374 ntBASIC23.07■■□□□ 1.28
CISHQ9NSE2 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC23.07■■□□□ 1.28
CISHQ9NSE2 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.07■■□□□ 1.28
CISHQ9NSE2 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.07■■□□□ 1.28
CISHQ9NSE2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC23.07■■□□□ 1.28
CISHQ9NSE2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CISHQ9NSE2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CISHQ9NSE2 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
CISHQ9NSE2 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CISHQ9NSE2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CISHQ9NSE2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.06■■□□□ 1.28
CISHQ9NSE2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.06■■□□□ 1.28
CISHQ9NSE2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CISHQ9NSE2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CISHQ9NSE2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CISHQ9NSE2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CISHQ9NSE2 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CISHQ9NSE2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.05■■□□□ 1.28
CISHQ9NSE2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC23.05■■□□□ 1.28
CISHQ9NSE2 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.05■■□□□ 1.28
CISHQ9NSE2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
CISHQ9NSE2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CISHQ9NSE2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.05■■□□□ 1.28
CISHQ9NSE2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC23.05■■□□□ 1.28
CISHQ9NSE2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CISHQ9NSE2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
CISHQ9NSE2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.05■■□□□ 1.28
CISHQ9NSE2 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CISHQ9NSE2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CISHQ9NSE2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.04■■□□□ 1.28
CISHQ9NSE2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CISHQ9NSE2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.04■■□□□ 1.28
CISHQ9NSE2 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.04■■□□□ 1.28
CISHQ9NSE2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.04■■□□□ 1.28
CISHQ9NSE2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC23.04■■□□□ 1.28
CISHQ9NSE2 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC23.04■■□□□ 1.28
CISHQ9NSE2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.04■■□□□ 1.28
CISHQ9NSE2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.04■■□□□ 1.28
CISHQ9NSE2 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC23.04■■□□□ 1.28
CISHQ9NSE2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.04■■□□□ 1.28
CISHQ9NSE2 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.04■■□□□ 1.28
CISHQ9NSE2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CISHQ9NSE2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CISHQ9NSE2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CISHQ9NSE2 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CISHQ9NSE2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
CISHQ9NSE2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
CISHQ9NSE2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CISHQ9NSE2 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CISHQ9NSE2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CISHQ9NSE2 AC012414.1-201ENST00000556676 535 ntBASIC23.03■■□□□ 1.28
CISHQ9NSE2 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.03■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms