Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
VTA1Q9NP79 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
VTA1Q9NP79 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
VTA1Q9NP79 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VTA1Q9NP79 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.35■■□□□ 1.49
VTA1Q9NP79 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.35■■□□□ 1.49
VTA1Q9NP79 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
VTA1Q9NP79 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.35■■□□□ 1.49
VTA1Q9NP79 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.35■■□□□ 1.49
VTA1Q9NP79 AC231657.2-201ENST00000624556 255 ntBASIC24.35■■□□□ 1.49
VTA1Q9NP79 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC24.35■■□□□ 1.49
VTA1Q9NP79 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VTA1Q9NP79 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
VTA1Q9NP79 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
VTA1Q9NP79 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.34■■□□□ 1.49
VTA1Q9NP79 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
VTA1Q9NP79 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
VTA1Q9NP79 GPX1P1-201ENST00000388829 606 ntBASIC24.34■■□□□ 1.49
VTA1Q9NP79 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
VTA1Q9NP79 AL355802.2-201ENST00000402069 882 ntBASIC24.34■■□□□ 1.49
VTA1Q9NP79 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.34■■□□□ 1.49
VTA1Q9NP79 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.34■■□□□ 1.49
VTA1Q9NP79 DUX4L16-201ENST00000555130 1264 ntBASIC24.34■■□□□ 1.49
VTA1Q9NP79 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.34■■□□□ 1.49
VTA1Q9NP79 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.34■■□□□ 1.49
VTA1Q9NP79 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
VTA1Q9NP79 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
VTA1Q9NP79 AP004607.7-201ENST00000527152 1677 ntBASIC24.34■■□□□ 1.49
VTA1Q9NP79 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.33■■□□□ 1.49
VTA1Q9NP79 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
VTA1Q9NP79 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
VTA1Q9NP79 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC24.33■■□□□ 1.49
VTA1Q9NP79 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
VTA1Q9NP79 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
VTA1Q9NP79 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
VTA1Q9NP79 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC24.33■■□□□ 1.49
VTA1Q9NP79 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
VTA1Q9NP79 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.33■■□□□ 1.49
VTA1Q9NP79 MYCNOS-205ENST00000641950 531 ntBASIC24.33■■□□□ 1.49
VTA1Q9NP79 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
VTA1Q9NP79 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
VTA1Q9NP79 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
VTA1Q9NP79 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
VTA1Q9NP79 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
VTA1Q9NP79 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.32■■□□□ 1.48
VTA1Q9NP79 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
VTA1Q9NP79 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.32■■□□□ 1.48
VTA1Q9NP79 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.32■■□□□ 1.48
VTA1Q9NP79 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
VTA1Q9NP79 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.32■■□□□ 1.48
VTA1Q9NP79 OR7E47P-201ENST00000546390 1422 ntBASIC24.32■■□□□ 1.48
VTA1Q9NP79 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.32■■□□□ 1.48
VTA1Q9NP79 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC24.32■■□□□ 1.48
VTA1Q9NP79 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
VTA1Q9NP79 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
VTA1Q9NP79 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
VTA1Q9NP79 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.32■■□□□ 1.48
VTA1Q9NP79 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
VTA1Q9NP79 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.31■■□□□ 1.48
VTA1Q9NP79 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC24.31■■□□□ 1.48
VTA1Q9NP79 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.31■■□□□ 1.48
VTA1Q9NP79 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
VTA1Q9NP79 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
VTA1Q9NP79 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
VTA1Q9NP79 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
VTA1Q9NP79 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
VTA1Q9NP79 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.3■■□□□ 1.48
VTA1Q9NP79 AC007322.1-201ENST00000426983 750 ntBASIC24.3■■□□□ 1.48
VTA1Q9NP79 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC24.3■■□□□ 1.48
VTA1Q9NP79 AL034346.1-201ENST00000568244 1277 ntBASIC24.3■■□□□ 1.48
VTA1Q9NP79 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.3■■□□□ 1.48
VTA1Q9NP79 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.3■■□□□ 1.48
VTA1Q9NP79 AL050303.2-201ENST00000619798 666 ntBASIC24.3■■□□□ 1.48
VTA1Q9NP79 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
VTA1Q9NP79 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
VTA1Q9NP79 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC24.29■■□□□ 1.48
VTA1Q9NP79 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
VTA1Q9NP79 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
VTA1Q9NP79 AC010141.2-201ENST00000452426 721 ntBASIC24.29■■□□□ 1.48
VTA1Q9NP79 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
VTA1Q9NP79 BRI3-207ENST00000539286 699 ntTSL 2 BASIC24.29■■□□□ 1.48
VTA1Q9NP79 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.29■■□□□ 1.48
VTA1Q9NP79 AC138907.5-202ENST00000569484 235 ntBASIC24.29■■□□□ 1.48
VTA1Q9NP79 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC24.29■■□□□ 1.48
VTA1Q9NP79 AL121832.2-201ENST00000610979 668 ntBASIC24.29■■□□□ 1.48
VTA1Q9NP79 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
VTA1Q9NP79 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
VTA1Q9NP79 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC24.28■■□□□ 1.48
VTA1Q9NP79 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
VTA1Q9NP79 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC24.28■■□□□ 1.48
VTA1Q9NP79 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.28■■□□□ 1.48
VTA1Q9NP79 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
VTA1Q9NP79 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC24.27■■□□□ 1.48
VTA1Q9NP79 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
VTA1Q9NP79 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC24.27■■□□□ 1.48
VTA1Q9NP79 KRT18P20-201ENST00000548986 1279 ntBASIC24.27■■□□□ 1.48
VTA1Q9NP79 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC24.27■■□□□ 1.48
VTA1Q9NP79 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
VTA1Q9NP79 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.27■■□□□ 1.48
VTA1Q9NP79 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms