Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.76■□□□□ 0.91
LRTM1Q9HBL6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRTM1Q9HBL6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRTM1Q9HBL6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRTM1Q9HBL6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LRTM1Q9HBL6 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRTM1Q9HBL6 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRTM1Q9HBL6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRTM1Q9HBL6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LRTM1Q9HBL6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.75■□□□□ 0.91
LRTM1Q9HBL6 AC092171.4-201ENST00000609130 632 ntBASIC20.75■□□□□ 0.91
LRTM1Q9HBL6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
LRTM1Q9HBL6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.75■□□□□ 0.91
LRTM1Q9HBL6 AC026310.3-201ENST00000625186 2373 ntBASIC20.75■□□□□ 0.91
LRTM1Q9HBL6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.75■□□□□ 0.91
LRTM1Q9HBL6 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRTM1Q9HBL6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.75■□□□□ 0.91
LRTM1Q9HBL6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRTM1Q9HBL6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRTM1Q9HBL6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LRTM1Q9HBL6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRTM1Q9HBL6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.74■□□□□ 0.91
LRTM1Q9HBL6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRTM1Q9HBL6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRTM1Q9HBL6 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRTM1Q9HBL6 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRTM1Q9HBL6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRTM1Q9HBL6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.74■□□□□ 0.91
LRTM1Q9HBL6 OR2I1P-207ENST00000453522 948 ntBASIC20.74■□□□□ 0.91
LRTM1Q9HBL6 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LRTM1Q9HBL6 AL512631.2-201ENST00000604634 923 ntBASIC20.74■□□□□ 0.91
LRTM1Q9HBL6 AC244015.2-201ENST00000616358 1861 ntBASIC20.74■□□□□ 0.91
LRTM1Q9HBL6 AC068587.7-201ENST00000641602 218 ntBASIC20.74■□□□□ 0.91
LRTM1Q9HBL6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.74■□□□□ 0.91
LRTM1Q9HBL6 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRTM1Q9HBL6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRTM1Q9HBL6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.74■□□□□ 0.91
LRTM1Q9HBL6 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LRTM1Q9HBL6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRTM1Q9HBL6 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRTM1Q9HBL6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
LRTM1Q9HBL6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRTM1Q9HBL6 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
LRTM1Q9HBL6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.73■□□□□ 0.91
LRTM1Q9HBL6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRTM1Q9HBL6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.73■□□□□ 0.91
LRTM1Q9HBL6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRTM1Q9HBL6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.73■□□□□ 0.91
LRTM1Q9HBL6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRTM1Q9HBL6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRTM1Q9HBL6 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRTM1Q9HBL6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LRTM1Q9HBL6 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LRTM1Q9HBL6 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
LRTM1Q9HBL6 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.73■□□□□ 0.91
LRTM1Q9HBL6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRTM1Q9HBL6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRTM1Q9HBL6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
LRTM1Q9HBL6 OR7E47P-201ENST00000546390 1422 ntBASIC20.72■□□□□ 0.91
LRTM1Q9HBL6 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LRTM1Q9HBL6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.72■□□□□ 0.91
LRTM1Q9HBL6 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRTM1Q9HBL6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRTM1Q9HBL6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.72■□□□□ 0.91
LRTM1Q9HBL6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LRTM1Q9HBL6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
LRTM1Q9HBL6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LRTM1Q9HBL6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.72■□□□□ 0.91
LRTM1Q9HBL6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LRTM1Q9HBL6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRTM1Q9HBL6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRTM1Q9HBL6 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LRTM1Q9HBL6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.71■□□□□ 0.91
LRTM1Q9HBL6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.71■□□□□ 0.91
LRTM1Q9HBL6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRTM1Q9HBL6 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LRTM1Q9HBL6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.71■□□□□ 0.91
LRTM1Q9HBL6 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.71■□□□□ 0.91
LRTM1Q9HBL6 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRTM1Q9HBL6 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LRTM1Q9HBL6 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LRTM1Q9HBL6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.71■□□□□ 0.91
LRTM1Q9HBL6 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
LRTM1Q9HBL6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
LRTM1Q9HBL6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.7■□□□□ 0.9
LRTM1Q9HBL6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LRTM1Q9HBL6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRTM1Q9HBL6 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.7■□□□□ 0.9
LRTM1Q9HBL6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.7■□□□□ 0.9
LRTM1Q9HBL6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRTM1Q9HBL6 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.7■□□□□ 0.9
LRTM1Q9HBL6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRTM1Q9HBL6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.7■□□□□ 0.9
LRTM1Q9HBL6 AL356441.2-201ENST00000443009 864 ntBASIC20.7■□□□□ 0.9
LRTM1Q9HBL6 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.7■□□□□ 0.9
LRTM1Q9HBL6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRTM1Q9HBL6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LRTM1Q9HBL6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LRTM1Q9HBL6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LRTM1Q9HBL6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms