Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC23.61■■□□□ 1.37
KCNF1Q9H3M0 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.61■■□□□ 1.37
KCNF1Q9H3M0 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KCNF1Q9H3M0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
KCNF1Q9H3M0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
KCNF1Q9H3M0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
KCNF1Q9H3M0 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNF1Q9H3M0 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.6■■□□□ 1.37
KCNF1Q9H3M0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.6■■□□□ 1.37
KCNF1Q9H3M0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
KCNF1Q9H3M0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNF1Q9H3M0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.6■■□□□ 1.37
KCNF1Q9H3M0 MIR4281-201ENST00000580852 62 ntBASIC23.6■■□□□ 1.37
KCNF1Q9H3M0 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNF1Q9H3M0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.6■■□□□ 1.37
KCNF1Q9H3M0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNF1Q9H3M0 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNF1Q9H3M0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
KCNF1Q9H3M0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNF1Q9H3M0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
KCNF1Q9H3M0 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC23.59■■□□□ 1.37
KCNF1Q9H3M0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
KCNF1Q9H3M0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
KCNF1Q9H3M0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KCNF1Q9H3M0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KCNF1Q9H3M0 AC022616.5-201ENST00000518796 181 ntBASIC23.59■■□□□ 1.37
KCNF1Q9H3M0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KCNF1Q9H3M0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KCNF1Q9H3M0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KCNF1Q9H3M0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
KCNF1Q9H3M0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC23.59■■□□□ 1.37
KCNF1Q9H3M0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
KCNF1Q9H3M0 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
KCNF1Q9H3M0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
KCNF1Q9H3M0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
KCNF1Q9H3M0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.58■■□□□ 1.37
KCNF1Q9H3M0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC23.58■■□□□ 1.37
KCNF1Q9H3M0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
KCNF1Q9H3M0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
KCNF1Q9H3M0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
KCNF1Q9H3M0 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
KCNF1Q9H3M0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
KCNF1Q9H3M0 FP325331.1-202ENST00000623531 1380 ntBASIC23.58■■□□□ 1.37
KCNF1Q9H3M0 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
KCNF1Q9H3M0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
KCNF1Q9H3M0 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
KCNF1Q9H3M0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
KCNF1Q9H3M0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
KCNF1Q9H3M0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
KCNF1Q9H3M0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.36
KCNF1Q9H3M0 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
KCNF1Q9H3M0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
KCNF1Q9H3M0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.57■■□□□ 1.36
KCNF1Q9H3M0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.57■■□□□ 1.36
KCNF1Q9H3M0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KCNF1Q9H3M0 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.57■■□□□ 1.36
KCNF1Q9H3M0 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.57■■□□□ 1.36
KCNF1Q9H3M0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
KCNF1Q9H3M0 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KCNF1Q9H3M0 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC23.57■■□□□ 1.36
KCNF1Q9H3M0 MIR7108-201ENST00000614319 87 ntBASIC23.57■■□□□ 1.36
KCNF1Q9H3M0 AC009086.3-201ENST00000623486 1008 ntBASIC23.57■■□□□ 1.36
KCNF1Q9H3M0 AC004687.1-201ENST00000579003 1625 ntBASIC23.57■■□□□ 1.36
KCNF1Q9H3M0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KCNF1Q9H3M0 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KCNF1Q9H3M0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KCNF1Q9H3M0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
KCNF1Q9H3M0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
KCNF1Q9H3M0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.57■■□□□ 1.36
KCNF1Q9H3M0 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
KCNF1Q9H3M0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KCNF1Q9H3M0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KCNF1Q9H3M0 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
KCNF1Q9H3M0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.56■■□□□ 1.36
KCNF1Q9H3M0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
KCNF1Q9H3M0 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KCNF1Q9H3M0 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KCNF1Q9H3M0 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KCNF1Q9H3M0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.56■■□□□ 1.36
KCNF1Q9H3M0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.56■■□□□ 1.36
KCNF1Q9H3M0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
KCNF1Q9H3M0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KCNF1Q9H3M0 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
KCNF1Q9H3M0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.56■■□□□ 1.36
KCNF1Q9H3M0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
KCNF1Q9H3M0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
KCNF1Q9H3M0 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
KCNF1Q9H3M0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.55■■□□□ 1.36
KCNF1Q9H3M0 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
KCNF1Q9H3M0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
KCNF1Q9H3M0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
KCNF1Q9H3M0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.55■■□□□ 1.36
KCNF1Q9H3M0 THA1P-201ENST00000590384 1145 ntBASIC23.55■■□□□ 1.36
KCNF1Q9H3M0 AC019171.1-201ENST00000601251 1056 ntBASIC23.55■■□□□ 1.36
KCNF1Q9H3M0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.55■■□□□ 1.36
KCNF1Q9H3M0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.55■■□□□ 1.36
KCNF1Q9H3M0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
KCNF1Q9H3M0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC23.55■■□□□ 1.36
KCNF1Q9H3M0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
KCNF1Q9H3M0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms