Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
VPS16Q9H269 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.72■■□□□ 1.39
VPS16Q9H269 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
VPS16Q9H269 AC005229.4-201ENST00000610085 2198 ntBASIC23.72■■□□□ 1.39
VPS16Q9H269 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
VPS16Q9H269 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.72■■□□□ 1.39
VPS16Q9H269 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
VPS16Q9H269 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.72■■□□□ 1.39
VPS16Q9H269 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
VPS16Q9H269 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
VPS16Q9H269 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
VPS16Q9H269 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
VPS16Q9H269 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
VPS16Q9H269 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.72■■□□□ 1.39
VPS16Q9H269 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC23.72■■□□□ 1.39
VPS16Q9H269 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
VPS16Q9H269 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
VPS16Q9H269 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
VPS16Q9H269 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.71■■□□□ 1.39
VPS16Q9H269 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS16Q9H269 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS16Q9H269 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS16Q9H269 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
VPS16Q9H269 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC23.71■■□□□ 1.39
VPS16Q9H269 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS16Q9H269 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS16Q9H269 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS16Q9H269 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS16Q9H269 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
VPS16Q9H269 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
VPS16Q9H269 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC23.7■■□□□ 1.39
VPS16Q9H269 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS16Q9H269 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.7■■□□□ 1.38
VPS16Q9H269 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS16Q9H269 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS16Q9H269 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.7■■□□□ 1.38
VPS16Q9H269 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
VPS16Q9H269 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS16Q9H269 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS16Q9H269 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.7■■□□□ 1.38
VPS16Q9H269 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.7■■□□□ 1.38
VPS16Q9H269 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
VPS16Q9H269 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.7■■□□□ 1.38
VPS16Q9H269 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.7■■□□□ 1.38
VPS16Q9H269 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.7■■□□□ 1.38
VPS16Q9H269 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
VPS16Q9H269 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS16Q9H269 AL035685.1-201ENST00000636663 812 ntBASIC23.69■■□□□ 1.38
VPS16Q9H269 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS16Q9H269 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS16Q9H269 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS16Q9H269 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
VPS16Q9H269 AC026471.6-201ENST00000622954 1905 ntBASIC23.69■■□□□ 1.38
VPS16Q9H269 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
VPS16Q9H269 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.68■■□□□ 1.38
VPS16Q9H269 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
VPS16Q9H269 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC23.68■■□□□ 1.38
VPS16Q9H269 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.68■■□□□ 1.38
VPS16Q9H269 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.68■■□□□ 1.38
VPS16Q9H269 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.68■■□□□ 1.38
VPS16Q9H269 AC079089.2-201ENST00000531211 1277 ntBASIC23.68■■□□□ 1.38
VPS16Q9H269 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.68■■□□□ 1.38
VPS16Q9H269 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
VPS16Q9H269 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
VPS16Q9H269 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.68■■□□□ 1.38
VPS16Q9H269 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
VPS16Q9H269 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS16Q9H269 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS16Q9H269 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
VPS16Q9H269 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
VPS16Q9H269 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS16Q9H269 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS16Q9H269 AL356740.2-201ENST00000601559 647 ntBASIC23.67■■□□□ 1.38
VPS16Q9H269 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.67■■□□□ 1.38
VPS16Q9H269 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.67■■□□□ 1.38
VPS16Q9H269 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS16Q9H269 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
VPS16Q9H269 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.67■■□□□ 1.38
VPS16Q9H269 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS16Q9H269 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS16Q9H269 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.67■■□□□ 1.38
VPS16Q9H269 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS16Q9H269 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.67■■□□□ 1.38
VPS16Q9H269 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.67■■□□□ 1.38
VPS16Q9H269 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
VPS16Q9H269 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.67■■□□□ 1.38
VPS16Q9H269 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC23.66■■□□□ 1.38
VPS16Q9H269 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS16Q9H269 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS16Q9H269 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS16Q9H269 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS16Q9H269 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.66■■□□□ 1.38
VPS16Q9H269 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
VPS16Q9H269 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.66■■□□□ 1.38
VPS16Q9H269 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
VPS16Q9H269 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS16Q9H269 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS16Q9H269 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
VPS16Q9H269 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
VPS16Q9H269 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms