Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.4■■□□□ 1.34
NUCKS1Q9H1E3 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
NUCKS1Q9H1E3 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
NUCKS1Q9H1E3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
NUCKS1Q9H1E3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.4■■□□□ 1.34
NUCKS1Q9H1E3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
NUCKS1Q9H1E3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
NUCKS1Q9H1E3 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
NUCKS1Q9H1E3 AC026310.3-201ENST00000625186 2373 ntBASIC23.4■■□□□ 1.34
NUCKS1Q9H1E3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.4■■□□□ 1.34
NUCKS1Q9H1E3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
NUCKS1Q9H1E3 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NUCKS1Q9H1E3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NUCKS1Q9H1E3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.39■■□□□ 1.33
NUCKS1Q9H1E3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
NUCKS1Q9H1E3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.38■■□□□ 1.33
NUCKS1Q9H1E3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
NUCKS1Q9H1E3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NUCKS1Q9H1E3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NUCKS1Q9H1E3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NUCKS1Q9H1E3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
NUCKS1Q9H1E3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
NUCKS1Q9H1E3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
NUCKS1Q9H1E3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NUCKS1Q9H1E3 SRD5A1P1-201ENST00000442297 786 ntBASIC23.38■■□□□ 1.33
NUCKS1Q9H1E3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC23.38■■□□□ 1.33
NUCKS1Q9H1E3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.38■■□□□ 1.33
NUCKS1Q9H1E3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
NUCKS1Q9H1E3 AC133637.1-201ENST00000624115 1537 ntBASIC23.38■■□□□ 1.33
NUCKS1Q9H1E3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
NUCKS1Q9H1E3 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
NUCKS1Q9H1E3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NUCKS1Q9H1E3 AL137060.1-201ENST00000618151 2648 ntBASIC23.37■■□□□ 1.33
NUCKS1Q9H1E3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC23.37■■□□□ 1.33
NUCKS1Q9H1E3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
NUCKS1Q9H1E3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
NUCKS1Q9H1E3 AC079089.2-201ENST00000531211 1277 ntBASIC23.37■■□□□ 1.33
NUCKS1Q9H1E3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
NUCKS1Q9H1E3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
NUCKS1Q9H1E3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NUCKS1Q9H1E3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NUCKS1Q9H1E3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
NUCKS1Q9H1E3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.36■■□□□ 1.33
NUCKS1Q9H1E3 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NUCKS1Q9H1E3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.36■■□□□ 1.33
NUCKS1Q9H1E3 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NUCKS1Q9H1E3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.36■■□□□ 1.33
NUCKS1Q9H1E3 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.36■■□□□ 1.33
NUCKS1Q9H1E3 AC068587.7-201ENST00000641602 218 ntBASIC23.36■■□□□ 1.33
NUCKS1Q9H1E3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
NUCKS1Q9H1E3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
NUCKS1Q9H1E3 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.36■■□□□ 1.33
NUCKS1Q9H1E3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
NUCKS1Q9H1E3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NUCKS1Q9H1E3 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.35■■□□□ 1.33
NUCKS1Q9H1E3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC23.35■■□□□ 1.33
NUCKS1Q9H1E3 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NUCKS1Q9H1E3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
NUCKS1Q9H1E3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NUCKS1Q9H1E3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
NUCKS1Q9H1E3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.35■■□□□ 1.33
NUCKS1Q9H1E3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.35■■□□□ 1.33
NUCKS1Q9H1E3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.35■■□□□ 1.33
NUCKS1Q9H1E3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.35■■□□□ 1.33
NUCKS1Q9H1E3 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NUCKS1Q9H1E3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
NUCKS1Q9H1E3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
NUCKS1Q9H1E3 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
NUCKS1Q9H1E3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.35■■□□□ 1.33
NUCKS1Q9H1E3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.34■■□□□ 1.33
NUCKS1Q9H1E3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.34■■□□□ 1.33
NUCKS1Q9H1E3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
NUCKS1Q9H1E3 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
NUCKS1Q9H1E3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
NUCKS1Q9H1E3 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.34■■□□□ 1.33
NUCKS1Q9H1E3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.34■■□□□ 1.33
NUCKS1Q9H1E3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
NUCKS1Q9H1E3 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC23.33■■□□□ 1.33
NUCKS1Q9H1E3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
NUCKS1Q9H1E3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
NUCKS1Q9H1E3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NUCKS1Q9H1E3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC23.33■■□□□ 1.33
NUCKS1Q9H1E3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
NUCKS1Q9H1E3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
NUCKS1Q9H1E3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
NUCKS1Q9H1E3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.33■■□□□ 1.33
NUCKS1Q9H1E3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.33■■□□□ 1.32
NUCKS1Q9H1E3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.33■■□□□ 1.32
NUCKS1Q9H1E3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.32■■□□□ 1.32
NUCKS1Q9H1E3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
NUCKS1Q9H1E3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NUCKS1Q9H1E3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NUCKS1Q9H1E3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
NUCKS1Q9H1E3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NUCKS1Q9H1E3 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
NUCKS1Q9H1E3 AC096631.2-201ENST00000436136 790 ntBASIC23.32■■□□□ 1.32
NUCKS1Q9H1E3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.32■■□□□ 1.32
NUCKS1Q9H1E3 pRNA.6-201ENST00000610482 90 ntBASIC23.32■■□□□ 1.32
NUCKS1Q9H1E3 pRNA.5-201ENST00000612139 90 ntBASIC23.32■■□□□ 1.32
NUCKS1Q9H1E3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.32■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms