Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
KRTAP3-1Q9BYR8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-1Q9BYR8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-1Q9BYR8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-1Q9BYR8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-1Q9BYR8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC10.96□□□□□ -0.65
KRTAP3-1Q9BYR8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-1Q9BYR8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-1Q9BYR8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-1Q9BYR8 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
KRTAP3-1Q9BYR8 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-1Q9BYR8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
KRTAP3-1Q9BYR8 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC10.96□□□□□ -0.65
KRTAP3-1Q9BYR8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
KRTAP3-1Q9BYR8 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC10.96□□□□□ -0.65
KRTAP3-1Q9BYR8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
KRTAP3-1Q9BYR8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
KRTAP3-1Q9BYR8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
KRTAP3-1Q9BYR8 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
KRTAP3-1Q9BYR8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
KRTAP3-1Q9BYR8 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
KRTAP3-1Q9BYR8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
KRTAP3-1Q9BYR8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 KRT8P33-201ENST00000508125 1423 ntBASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 LINC01521-201ENST00000504184 1943 ntBASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
KRTAP3-1Q9BYR8 C17orf82-201ENST00000623772 1530 ntBASIC10.94□□□□□ -0.66
KRTAP3-1Q9BYR8 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
KRTAP3-1Q9BYR8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC10.94□□□□□ -0.66
KRTAP3-1Q9BYR8 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-1Q9BYR8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-1Q9BYR8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC10.94□□□□□ -0.66
KRTAP3-1Q9BYR8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-1Q9BYR8 AL499627.2-201ENST00000606283 725 ntBASIC10.94□□□□□ -0.66
KRTAP3-1Q9BYR8 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
KRTAP3-1Q9BYR8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-1Q9BYR8 VGF-203ENST00000611537 1622 ntTSL 5 BASIC10.94□□□□□ -0.66
KRTAP3-1Q9BYR8 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-1Q9BYR8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
KRTAP3-1Q9BYR8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
KRTAP3-1Q9BYR8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms