Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CDCA4Q9BXL8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA4Q9BXL8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CDCA4Q9BXL8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA4Q9BXL8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA4Q9BXL8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA4Q9BXL8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA4Q9BXL8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.37■□□□□ 0.69
CDCA4Q9BXL8 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.37■□□□□ 0.69
CDCA4Q9BXL8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.37■□□□□ 0.69
CDCA4Q9BXL8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA4Q9BXL8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA4Q9BXL8 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA4Q9BXL8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDCA4Q9BXL8 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CDCA4Q9BXL8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA4Q9BXL8 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA4Q9BXL8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.36■□□□□ 0.69
CDCA4Q9BXL8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.36■□□□□ 0.69
CDCA4Q9BXL8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA4Q9BXL8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA4Q9BXL8 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CDCA4Q9BXL8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA4Q9BXL8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CDCA4Q9BXL8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA4Q9BXL8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA4Q9BXL8 LINC01006-201ENST00000333319 2292 ntBASIC19.36■□□□□ 0.69
CDCA4Q9BXL8 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CDCA4Q9BXL8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.36■□□□□ 0.69
CDCA4Q9BXL8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA4Q9BXL8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDCA4Q9BXL8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA4Q9BXL8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA4Q9BXL8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.35■□□□□ 0.69
CDCA4Q9BXL8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CDCA4Q9BXL8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.35■□□□□ 0.69
CDCA4Q9BXL8 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA4Q9BXL8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.35■□□□□ 0.69
CDCA4Q9BXL8 SNX5-217ENST00000606557 1087 ntBASIC19.35■□□□□ 0.69
CDCA4Q9BXL8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CDCA4Q9BXL8 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA4Q9BXL8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA4Q9BXL8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA4Q9BXL8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.35■□□□□ 0.69
CDCA4Q9BXL8 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA4Q9BXL8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA4Q9BXL8 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDCA4Q9BXL8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.35■□□□□ 0.69
CDCA4Q9BXL8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
CDCA4Q9BXL8 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA4Q9BXL8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.34■□□□□ 0.69
CDCA4Q9BXL8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA4Q9BXL8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA4Q9BXL8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.34■□□□□ 0.69
CDCA4Q9BXL8 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA4Q9BXL8 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.34■□□□□ 0.69
CDCA4Q9BXL8 AC139795.1-202ENST00000500444 432 ntBASIC19.34■□□□□ 0.69
CDCA4Q9BXL8 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.34■□□□□ 0.69
CDCA4Q9BXL8 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA4Q9BXL8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA4Q9BXL8 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDCA4Q9BXL8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
CDCA4Q9BXL8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDCA4Q9BXL8 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDCA4Q9BXL8 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.33■□□□□ 0.69
CDCA4Q9BXL8 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.33■□□□□ 0.69
CDCA4Q9BXL8 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDCA4Q9BXL8 BHLHE23-202ENST00000612929 1109 ntBASIC19.33■□□□□ 0.68
CDCA4Q9BXL8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.33■□□□□ 0.68
CDCA4Q9BXL8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.33■□□□□ 0.68
CDCA4Q9BXL8 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
CDCA4Q9BXL8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDCA4Q9BXL8 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CDCA4Q9BXL8 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDCA4Q9BXL8 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDCA4Q9BXL8 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.33■□□□□ 0.68
CDCA4Q9BXL8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDCA4Q9BXL8 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.33■□□□□ 0.68
CDCA4Q9BXL8 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
CDCA4Q9BXL8 AC004687.1-201ENST00000579003 1625 ntBASIC19.33■□□□□ 0.68
CDCA4Q9BXL8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA4Q9BXL8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA4Q9BXL8 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA4Q9BXL8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA4Q9BXL8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.32■□□□□ 0.68
CDCA4Q9BXL8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA4Q9BXL8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.32■□□□□ 0.68
CDCA4Q9BXL8 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.32■□□□□ 0.68
CDCA4Q9BXL8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CDCA4Q9BXL8 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA4Q9BXL8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CDCA4Q9BXL8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDCA4Q9BXL8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.32■□□□□ 0.68
CDCA4Q9BXL8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CDCA4Q9BXL8 FEM1AP1-201ENST00000431297 1995 ntBASIC19.32■□□□□ 0.68
CDCA4Q9BXL8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CDCA4Q9BXL8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDCA4Q9BXL8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDCA4Q9BXL8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CDCA4Q9BXL8 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms