Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GFI1Q99684 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GFI1Q99684 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GFI1Q99684 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
GFI1Q99684 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GFI1Q99684 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFI1Q99684 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.68■□□□□ 0.58
GFI1Q99684 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFI1Q99684 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFI1Q99684 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
GFI1Q99684 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GFI1Q99684 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.68■□□□□ 0.58
GFI1Q99684 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GFI1Q99684 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFI1Q99684 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFI1Q99684 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.68■□□□□ 0.58
GFI1Q99684 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.68■□□□□ 0.58
GFI1Q99684 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.68■□□□□ 0.58
GFI1Q99684 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFI1Q99684 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFI1Q99684 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.68■□□□□ 0.58
GFI1Q99684 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GFI1Q99684 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GFI1Q99684 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GFI1Q99684 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC18.67■□□□□ 0.58
GFI1Q99684 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.67■□□□□ 0.58
GFI1Q99684 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GFI1Q99684 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
GFI1Q99684 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GFI1Q99684 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC18.67■□□□□ 0.58
GFI1Q99684 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GFI1Q99684 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.67■□□□□ 0.58
GFI1Q99684 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.67■□□□□ 0.58
GFI1Q99684 C17orf82-201ENST00000623772 1530 ntBASIC18.67■□□□□ 0.58
GFI1Q99684 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GFI1Q99684 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GFI1Q99684 AC021242.3-201ENST00000607598 1377 ntBASIC18.67■□□□□ 0.58
GFI1Q99684 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GFI1Q99684 KRT8P33-201ENST00000508125 1423 ntBASIC18.66■□□□□ 0.58
GFI1Q99684 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.66■□□□□ 0.58
GFI1Q99684 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.66■□□□□ 0.58
GFI1Q99684 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GFI1Q99684 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GFI1Q99684 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
GFI1Q99684 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFI1Q99684 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFI1Q99684 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.65■□□□□ 0.58
GFI1Q99684 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.65■□□□□ 0.58
GFI1Q99684 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFI1Q99684 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.65■□□□□ 0.58
GFI1Q99684 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
GFI1Q99684 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GFI1Q99684 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GFI1Q99684 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.65■□□□□ 0.58
GFI1Q99684 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFI1Q99684 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFI1Q99684 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
GFI1Q99684 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.65■□□□□ 0.58
GFI1Q99684 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFI1Q99684 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GFI1Q99684 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GFI1Q99684 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.64■□□□□ 0.57
GFI1Q99684 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.64■□□□□ 0.57
GFI1Q99684 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.64■□□□□ 0.57
GFI1Q99684 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.64■□□□□ 0.57
GFI1Q99684 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.64■□□□□ 0.57
GFI1Q99684 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
GFI1Q99684 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GFI1Q99684 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GFI1Q99684 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GFI1Q99684 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.64■□□□□ 0.57
GFI1Q99684 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GFI1Q99684 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
GFI1Q99684 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GFI1Q99684 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GFI1Q99684 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
GFI1Q99684 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GFI1Q99684 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GFI1Q99684 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.63■□□□□ 0.57
GFI1Q99684 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.63■□□□□ 0.57
GFI1Q99684 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GFI1Q99684 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GFI1Q99684 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
GFI1Q99684 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
GFI1Q99684 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.63■□□□□ 0.57
GFI1Q99684 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GFI1Q99684 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
GFI1Q99684 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.63■□□□□ 0.57
GFI1Q99684 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GFI1Q99684 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
GFI1Q99684 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GFI1Q99684 AC092667.1-201ENST00000434301 2586 ntBASIC18.62■□□□□ 0.57
GFI1Q99684 AL499627.2-201ENST00000606283 725 ntBASIC18.62■□□□□ 0.57
GFI1Q99684 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GFI1Q99684 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
GFI1Q99684 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.62■□□□□ 0.57
GFI1Q99684 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
GFI1Q99684 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
GFI1Q99684 LINC01006-201ENST00000333319 2292 ntBASIC18.61■□□□□ 0.57
GFI1Q99684 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms