Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC31.36■■■□□ 2.61
SCAF11Q99590 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
SCAF11Q99590 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC31.36■■■□□ 2.61
SCAF11Q99590 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SCAF11Q99590 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC31.36■■■□□ 2.61
SCAF11Q99590 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SCAF11Q99590 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SCAF11Q99590 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC31.35■■■□□ 2.61
SCAF11Q99590 RPS2P52-201ENST00000469610 820 ntBASIC31.35■■■□□ 2.61
SCAF11Q99590 AC105036.2-201ENST00000569468 176 ntBASIC31.35■■■□□ 2.61
SCAF11Q99590 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC31.35■■■□□ 2.61
SCAF11Q99590 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SCAF11Q99590 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SCAF11Q99590 OXCT2P1-201ENST00000447263 1535 ntBASIC31.35■■■□□ 2.61
SCAF11Q99590 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC31.35■■■□□ 2.61
SCAF11Q99590 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
SCAF11Q99590 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
SCAF11Q99590 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
SCAF11Q99590 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC31.34■■■□□ 2.61
SCAF11Q99590 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC31.34■■■□□ 2.61
SCAF11Q99590 AC098590.1-201ENST00000468126 897 ntBASIC31.34■■■□□ 2.61
SCAF11Q99590 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
SCAF11Q99590 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC31.33■■■□□ 2.61
SCAF11Q99590 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
SCAF11Q99590 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
SCAF11Q99590 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SCAF11Q99590 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
SCAF11Q99590 KRT18P29-201ENST00000397031 1267 ntBASIC31.33■■■□□ 2.61
SCAF11Q99590 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SCAF11Q99590 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
SCAF11Q99590 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
SCAF11Q99590 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC31.33■■■□□ 2.61
SCAF11Q99590 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC31.32■■■□□ 2.6
SCAF11Q99590 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
SCAF11Q99590 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SCAF11Q99590 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SCAF11Q99590 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC31.32■■■□□ 2.6
SCAF11Q99590 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SCAF11Q99590 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SCAF11Q99590 UQCRFS1P1-201ENST00000435169 820 ntBASIC31.31■■■□□ 2.6
SCAF11Q99590 RNA5SP413-201ENST00000516373 109 ntBASIC31.31■■■□□ 2.6
SCAF11Q99590 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC31.31■■■□□ 2.6
SCAF11Q99590 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SCAF11Q99590 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SCAF11Q99590 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
SCAF11Q99590 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
SCAF11Q99590 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
SCAF11Q99590 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SCAF11Q99590 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SCAF11Q99590 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC31.29■■■□□ 2.6
SCAF11Q99590 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
SCAF11Q99590 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
SCAF11Q99590 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SCAF11Q99590 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
SCAF11Q99590 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC31.28■■■□□ 2.6
SCAF11Q99590 AP001160.3-201ENST00000601484 763 ntBASIC31.28■■■□□ 2.6
SCAF11Q99590 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC31.28■■■□□ 2.6
SCAF11Q99590 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC31.28■■■□□ 2.6
SCAF11Q99590 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC31.28■■■□□ 2.6
SCAF11Q99590 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
SCAF11Q99590 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
SCAF11Q99590 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
SCAF11Q99590 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SCAF11Q99590 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC31.27■■■□□ 2.6
SCAF11Q99590 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
SCAF11Q99590 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC31.27■■■□□ 2.6
SCAF11Q99590 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
SCAF11Q99590 AL353803.4-201ENST00000565882 1934 ntBASIC31.27■■■□□ 2.6
SCAF11Q99590 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
SCAF11Q99590 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC31.27■■■□□ 2.6
SCAF11Q99590 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC31.27■■■□□ 2.6
SCAF11Q99590 SLC7A5P1-201ENST00000568957 537 ntBASIC31.27■■■□□ 2.6
SCAF11Q99590 AC010536.3-201ENST00000620306 533 ntBASIC31.27■■■□□ 2.6
SCAF11Q99590 MARS-234ENST00000630571 216 ntTSL 5 BASIC31.27■■■□□ 2.6
SCAF11Q99590 MARS-235ENST00000630803 183 ntTSL 3 BASIC31.27■■■□□ 2.6
SCAF11Q99590 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC31.26■■■□□ 2.6
SCAF11Q99590 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
SCAF11Q99590 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
SCAF11Q99590 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
SCAF11Q99590 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC31.26■■■□□ 2.59
SCAF11Q99590 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC31.26■■■□□ 2.59
SCAF11Q99590 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
SCAF11Q99590 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC31.26■■■□□ 2.59
SCAF11Q99590 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
SCAF11Q99590 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
SCAF11Q99590 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
SCAF11Q99590 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC31.25■■■□□ 2.59
SCAF11Q99590 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SCAF11Q99590 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
SCAF11Q99590 CYP2T1P-201ENST00000432607 1285 ntBASIC31.25■■■□□ 2.59
SCAF11Q99590 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
SCAF11Q99590 AC009237.3-201ENST00000393279 1427 ntBASIC31.25■■■□□ 2.59
SCAF11Q99590 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC31.25■■■□□ 2.59
SCAF11Q99590 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
SCAF11Q99590 MFF-207ENST00000409565 1548 ntTSL 2 BASIC31.24■■■□□ 2.59
SCAF11Q99590 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SCAF11Q99590 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
SCAF11Q99590 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC31.24■■■□□ 2.59
SCAF11Q99590 MIR4758-201ENST00000577688 71 ntBASIC31.24■■■□□ 2.59
SCAF11Q99590 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms