Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PKP4Q99569 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.05■□□□□ 0.96
PKP4Q99569 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PKP4Q99569 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PKP4Q99569 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PKP4Q99569 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.05■□□□□ 0.96
PKP4Q99569 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PKP4Q99569 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP4Q99569 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP4Q99569 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.04■□□□□ 0.96
PKP4Q99569 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP4Q99569 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.04■□□□□ 0.96
PKP4Q99569 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.04■□□□□ 0.96
PKP4Q99569 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.04■□□□□ 0.96
PKP4Q99569 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP4Q99569 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PKP4Q99569 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.04■□□□□ 0.96
PKP4Q99569 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
PKP4Q99569 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.04■□□□□ 0.96
PKP4Q99569 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP4Q99569 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PKP4Q99569 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PKP4Q99569 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PKP4Q99569 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PKP4Q99569 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PKP4Q99569 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.03■□□□□ 0.96
PKP4Q99569 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PKP4Q99569 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PKP4Q99569 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.03■□□□□ 0.96
PKP4Q99569 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.03■□□□□ 0.96
PKP4Q99569 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PKP4Q99569 STOX2-205ENST00000513034 807 ntTSL 3 BASIC21.03■□□□□ 0.96
PKP4Q99569 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.03■□□□□ 0.96
PKP4Q99569 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PKP4Q99569 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PKP4Q99569 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PKP4Q99569 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.03■□□□□ 0.96
PKP4Q99569 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
PKP4Q99569 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.03■□□□□ 0.96
PKP4Q99569 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PKP4Q99569 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PKP4Q99569 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PKP4Q99569 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PKP4Q99569 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.02■□□□□ 0.96
PKP4Q99569 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PKP4Q99569 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC21.02■□□□□ 0.96
PKP4Q99569 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.02■□□□□ 0.96
PKP4Q99569 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PKP4Q99569 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.02■□□□□ 0.96
PKP4Q99569 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PKP4Q99569 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
PKP4Q99569 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
PKP4Q99569 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.02■□□□□ 0.95
PKP4Q99569 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKP4Q99569 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKP4Q99569 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKP4Q99569 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.01■□□□□ 0.95
PKP4Q99569 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
PKP4Q99569 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
PKP4Q99569 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
PKP4Q99569 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.01■□□□□ 0.95
PKP4Q99569 SMUG1P1-201ENST00000590640 811 ntBASIC21.01■□□□□ 0.95
PKP4Q99569 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.01■□□□□ 0.95
PKP4Q99569 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PKP4Q99569 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PKP4Q99569 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PKP4Q99569 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PKP4Q99569 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.01■□□□□ 0.95
PKP4Q99569 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PKP4Q99569 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PKP4Q99569 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
PKP4Q99569 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
PKP4Q99569 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21■□□□□ 0.95
PKP4Q99569 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21■□□□□ 0.95
PKP4Q99569 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PKP4Q99569 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PKP4Q99569 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC21■□□□□ 0.95
PKP4Q99569 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21■□□□□ 0.95
PKP4Q99569 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21■□□□□ 0.95
PKP4Q99569 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PKP4Q99569 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.99■□□□□ 0.95
PKP4Q99569 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PKP4Q99569 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PKP4Q99569 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
PKP4Q99569 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PKP4Q99569 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.99■□□□□ 0.95
PKP4Q99569 AC105265.2-201ENST00000467189 838 ntBASIC20.99■□□□□ 0.95
PKP4Q99569 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PKP4Q99569 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.99■□□□□ 0.95
PKP4Q99569 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PKP4Q99569 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PKP4Q99569 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PKP4Q99569 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PKP4Q99569 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.98■□□□□ 0.95
PKP4Q99569 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PKP4Q99569 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PKP4Q99569 MIR572-201ENST00000384983 95 ntBASIC20.98■□□□□ 0.95
PKP4Q99569 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
PKP4Q99569 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PKP4Q99569 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms