Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB3IPQ96QF0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RAB3IPQ96QF0 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RAB3IPQ96QF0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB3IPQ96QF0 AL592295.1-201ENST00000400984 884 ntBASIC21.04■□□□□ 0.96
RAB3IPQ96QF0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.04■□□□□ 0.96
RAB3IPQ96QF0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RAB3IPQ96QF0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAB3IPQ96QF0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB3IPQ96QF0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB3IPQ96QF0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.04■□□□□ 0.96
RAB3IPQ96QF0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAB3IPQ96QF0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RAB3IPQ96QF0 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB3IPQ96QF0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB3IPQ96QF0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RAB3IPQ96QF0 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RAB3IPQ96QF0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RAB3IPQ96QF0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
RAB3IPQ96QF0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
RAB3IPQ96QF0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB3IPQ96QF0 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RAB3IPQ96QF0 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC21.03■□□□□ 0.96
RAB3IPQ96QF0 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RAB3IPQ96QF0 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.03■□□□□ 0.96
RAB3IPQ96QF0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB3IPQ96QF0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RAB3IPQ96QF0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.03■□□□□ 0.96
RAB3IPQ96QF0 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.03■□□□□ 0.96
RAB3IPQ96QF0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RAB3IPQ96QF0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.03■□□□□ 0.96
RAB3IPQ96QF0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.02■□□□□ 0.96
RAB3IPQ96QF0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAB3IPQ96QF0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RAB3IPQ96QF0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RAB3IPQ96QF0 AC060814.1-201ENST00000554326 538 ntBASIC21.02■□□□□ 0.96
RAB3IPQ96QF0 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC21.02■□□□□ 0.96
RAB3IPQ96QF0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.02■□□□□ 0.96
RAB3IPQ96QF0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RAB3IPQ96QF0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RAB3IPQ96QF0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RAB3IPQ96QF0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.02■□□□□ 0.95
RAB3IPQ96QF0 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.02■□□□□ 0.95
RAB3IPQ96QF0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB3IPQ96QF0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
RAB3IPQ96QF0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB3IPQ96QF0 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAB3IPQ96QF0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.01■□□□□ 0.95
RAB3IPQ96QF0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.01■□□□□ 0.95
RAB3IPQ96QF0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB3IPQ96QF0 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAB3IPQ96QF0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RAB3IPQ96QF0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RAB3IPQ96QF0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAB3IPQ96QF0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC21■□□□□ 0.95
RAB3IPQ96QF0 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB3IPQ96QF0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RAB3IPQ96QF0 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC21■□□□□ 0.95
RAB3IPQ96QF0 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21■□□□□ 0.95
RAB3IPQ96QF0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21■□□□□ 0.95
RAB3IPQ96QF0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21■□□□□ 0.95
RAB3IPQ96QF0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RAB3IPQ96QF0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB3IPQ96QF0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RAB3IPQ96QF0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RAB3IPQ96QF0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.99■□□□□ 0.95
RAB3IPQ96QF0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IPQ96QF0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IPQ96QF0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.99■□□□□ 0.95
RAB3IPQ96QF0 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.99■□□□□ 0.95
RAB3IPQ96QF0 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IPQ96QF0 MIR639-201ENST00000384974 98 ntBASIC20.99■□□□□ 0.95
RAB3IPQ96QF0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IPQ96QF0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IPQ96QF0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IPQ96QF0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IPQ96QF0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.99■□□□□ 0.95
RAB3IPQ96QF0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IPQ96QF0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IPQ96QF0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IPQ96QF0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IPQ96QF0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RAB3IPQ96QF0 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB3IPQ96QF0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.98■□□□□ 0.95
RAB3IPQ96QF0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.98■□□□□ 0.95
RAB3IPQ96QF0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RAB3IPQ96QF0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
RAB3IPQ96QF0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB3IPQ96QF0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RAB3IPQ96QF0 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.98■□□□□ 0.95
RAB3IPQ96QF0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAB3IPQ96QF0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB3IPQ96QF0 LINC01960-201ENST00000563759 1884 ntBASIC20.98■□□□□ 0.95
RAB3IPQ96QF0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAB3IPQ96QF0 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IPQ96QF0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms