Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PRICKLE1Q96MT3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PRICKLE1Q96MT3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PRICKLE1Q96MT3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC22.33■■□□□ 1.17
PRICKLE1Q96MT3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PRICKLE1Q96MT3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PRICKLE1Q96MT3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.33■■□□□ 1.17
PRICKLE1Q96MT3 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.33■■□□□ 1.17
PRICKLE1Q96MT3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC22.33■■□□□ 1.17
PRICKLE1Q96MT3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PRICKLE1Q96MT3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
PRICKLE1Q96MT3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PRICKLE1Q96MT3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC22.33■■□□□ 1.16
PRICKLE1Q96MT3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRICKLE1Q96MT3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
PRICKLE1Q96MT3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRICKLE1Q96MT3 AC034268.1-201ENST00000441047 882 ntBASIC22.32■■□□□ 1.16
PRICKLE1Q96MT3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.32■■□□□ 1.16
PRICKLE1Q96MT3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.32■■□□□ 1.16
PRICKLE1Q96MT3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRICKLE1Q96MT3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.32■■□□□ 1.16
PRICKLE1Q96MT3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.32■■□□□ 1.16
PRICKLE1Q96MT3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRICKLE1Q96MT3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
PRICKLE1Q96MT3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PRICKLE1Q96MT3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC22.31■■□□□ 1.16
PRICKLE1Q96MT3 AC137767.1-201ENST00000602918 1920 ntBASIC22.31■■□□□ 1.16
PRICKLE1Q96MT3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
PRICKLE1Q96MT3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
PRICKLE1Q96MT3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PRICKLE1Q96MT3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
PRICKLE1Q96MT3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC22.31■■□□□ 1.16
PRICKLE1Q96MT3 KRT18P14-201ENST00000534205 1250 ntBASIC22.31■■□□□ 1.16
PRICKLE1Q96MT3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC22.31■■□□□ 1.16
PRICKLE1Q96MT3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC22.31■■□□□ 1.16
PRICKLE1Q96MT3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.31■■□□□ 1.16
PRICKLE1Q96MT3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
PRICKLE1Q96MT3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.31■■□□□ 1.16
PRICKLE1Q96MT3 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
PRICKLE1Q96MT3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
PRICKLE1Q96MT3 LINC00526-201ENST00000581067 1875 ntBASIC22.3■■□□□ 1.16
PRICKLE1Q96MT3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
PRICKLE1Q96MT3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.3■■□□□ 1.16
PRICKLE1Q96MT3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PRICKLE1Q96MT3 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PRICKLE1Q96MT3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
PRICKLE1Q96MT3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PRICKLE1Q96MT3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC22.3■■□□□ 1.16
PRICKLE1Q96MT3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
PRICKLE1Q96MT3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.3■■□□□ 1.16
PRICKLE1Q96MT3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
PRICKLE1Q96MT3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PRICKLE1Q96MT3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PRICKLE1Q96MT3 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PRICKLE1Q96MT3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PRICKLE1Q96MT3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC22.29■■□□□ 1.16
PRICKLE1Q96MT3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PRICKLE1Q96MT3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PRICKLE1Q96MT3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.29■■□□□ 1.16
PRICKLE1Q96MT3 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PRICKLE1Q96MT3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PRICKLE1Q96MT3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PRICKLE1Q96MT3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.29■■□□□ 1.16
PRICKLE1Q96MT3 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PRICKLE1Q96MT3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
PRICKLE1Q96MT3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PRICKLE1Q96MT3 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.28■■□□□ 1.16
PRICKLE1Q96MT3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PRICKLE1Q96MT3 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.28■■□□□ 1.16
PRICKLE1Q96MT3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.28■■□□□ 1.16
PRICKLE1Q96MT3 KRT18P5-201ENST00000436075 1291 ntBASIC22.28■■□□□ 1.16
PRICKLE1Q96MT3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PRICKLE1Q96MT3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PRICKLE1Q96MT3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PRICKLE1Q96MT3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
PRICKLE1Q96MT3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.28■■□□□ 1.16
PRICKLE1Q96MT3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PRICKLE1Q96MT3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PRICKLE1Q96MT3 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PRICKLE1Q96MT3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PRICKLE1Q96MT3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PRICKLE1Q96MT3 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.27■■□□□ 1.16
PRICKLE1Q96MT3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PRICKLE1Q96MT3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.27■■□□□ 1.16
PRICKLE1Q96MT3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC22.27■■□□□ 1.16
PRICKLE1Q96MT3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PRICKLE1Q96MT3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PRICKLE1Q96MT3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
PRICKLE1Q96MT3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PRICKLE1Q96MT3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
PRICKLE1Q96MT3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC22.27■■□□□ 1.16
PRICKLE1Q96MT3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PRICKLE1Q96MT3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.26■■□□□ 1.15
PRICKLE1Q96MT3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC22.26■■□□□ 1.15
PRICKLE1Q96MT3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.26■■□□□ 1.15
PRICKLE1Q96MT3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PRICKLE1Q96MT3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PRICKLE1Q96MT3 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.26■■□□□ 1.15
PRICKLE1Q96MT3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.26■■□□□ 1.15
PRICKLE1Q96MT3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms