Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
ZNF560Q96MR9 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ZNF560Q96MR9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
ZNF560Q96MR9 AC127496.7-201ENST00000625110 1798 ntBASIC23.14■■□□□ 1.3
ZNF560Q96MR9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ZNF560Q96MR9 AC139530.1-201ENST00000575312 1977 ntBASIC23.14■■□□□ 1.3
ZNF560Q96MR9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
ZNF560Q96MR9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
ZNF560Q96MR9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC23.14■■□□□ 1.29
ZNF560Q96MR9 AC005224.4-201ENST00000583262 1652 ntBASIC23.14■■□□□ 1.29
ZNF560Q96MR9 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZNF560Q96MR9 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC23.14■■□□□ 1.29
ZNF560Q96MR9 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.14■■□□□ 1.29
ZNF560Q96MR9 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC23.14■■□□□ 1.29
ZNF560Q96MR9 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.14■■□□□ 1.29
ZNF560Q96MR9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.14■■□□□ 1.29
ZNF560Q96MR9 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
ZNF560Q96MR9 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.14■■□□□ 1.29
ZNF560Q96MR9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZNF560Q96MR9 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.14■■□□□ 1.29
ZNF560Q96MR9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
ZNF560Q96MR9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF560Q96MR9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF560Q96MR9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
ZNF560Q96MR9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF560Q96MR9 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.13■■□□□ 1.29
ZNF560Q96MR9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
ZNF560Q96MR9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF560Q96MR9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
ZNF560Q96MR9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.13■■□□□ 1.29
ZNF560Q96MR9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF560Q96MR9 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC23.13■■□□□ 1.29
ZNF560Q96MR9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.13■■□□□ 1.29
ZNF560Q96MR9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ZNF560Q96MR9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF560Q96MR9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
ZNF560Q96MR9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF560Q96MR9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF560Q96MR9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF560Q96MR9 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF560Q96MR9 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.12■■□□□ 1.29
ZNF560Q96MR9 AC104564.3-201ENST00000582367 638 ntBASIC23.12■■□□□ 1.29
ZNF560Q96MR9 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.12■■□□□ 1.29
ZNF560Q96MR9 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC23.12■■□□□ 1.29
ZNF560Q96MR9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.12■■□□□ 1.29
ZNF560Q96MR9 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF560Q96MR9 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF560Q96MR9 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ZNF560Q96MR9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF560Q96MR9 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF560Q96MR9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC23.11■■□□□ 1.29
ZNF560Q96MR9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF560Q96MR9 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF560Q96MR9 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF560Q96MR9 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
ZNF560Q96MR9 KRT18P5-201ENST00000436075 1291 ntBASIC23.11■■□□□ 1.29
ZNF560Q96MR9 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF560Q96MR9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.11■■□□□ 1.29
ZNF560Q96MR9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
ZNF560Q96MR9 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF560Q96MR9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF560Q96MR9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.11■■□□□ 1.29
ZNF560Q96MR9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.11■■□□□ 1.29
ZNF560Q96MR9 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF560Q96MR9 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF560Q96MR9 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ZNF560Q96MR9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC23.11■■□□□ 1.29
ZNF560Q96MR9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
ZNF560Q96MR9 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF560Q96MR9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF560Q96MR9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
ZNF560Q96MR9 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
ZNF560Q96MR9 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.1■■□□□ 1.29
ZNF560Q96MR9 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
ZNF560Q96MR9 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF560Q96MR9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
ZNF560Q96MR9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF560Q96MR9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF560Q96MR9 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF560Q96MR9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ZNF560Q96MR9 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF560Q96MR9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
ZNF560Q96MR9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.09■■□□□ 1.29
ZNF560Q96MR9 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF560Q96MR9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC23.09■■□□□ 1.29
ZNF560Q96MR9 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.09■■□□□ 1.29
ZNF560Q96MR9 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
ZNF560Q96MR9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF560Q96MR9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ZNF560Q96MR9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.09■■□□□ 1.29
ZNF560Q96MR9 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ZNF560Q96MR9 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
ZNF560Q96MR9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
ZNF560Q96MR9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
ZNF560Q96MR9 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.08■■□□□ 1.29
ZNF560Q96MR9 AC079140.4-201ENST00000507448 529 ntBASIC23.08■■□□□ 1.29
ZNF560Q96MR9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.08■■□□□ 1.29
ZNF560Q96MR9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC23.08■■□□□ 1.29
ZNF560Q96MR9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.08■■□□□ 1.29
ZNF560Q96MR9 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms