Protein–RNA interactions for Protein: Q96CW5

TUBGCP3, Gamma-tubulin complex component 3, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3Q96CW5 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.94■□□□□ 0.94
TUBGCP3Q96CW5 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TUBGCP3Q96CW5 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TUBGCP3Q96CW5 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TUBGCP3Q96CW5 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC20.94■□□□□ 0.94
TUBGCP3Q96CW5 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TUBGCP3Q96CW5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.94■□□□□ 0.94
TUBGCP3Q96CW5 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.94■□□□□ 0.94
TUBGCP3Q96CW5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TUBGCP3Q96CW5 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TUBGCP3Q96CW5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TUBGCP3Q96CW5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.93■□□□□ 0.94
TUBGCP3Q96CW5 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TUBGCP3Q96CW5 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TUBGCP3Q96CW5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TUBGCP3Q96CW5 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TUBGCP3Q96CW5 AC009299.2-201ENST00000482477 511 ntBASIC20.93■□□□□ 0.94
TUBGCP3Q96CW5 AL117332.1-201ENST00000622628 974 ntBASIC20.93■□□□□ 0.94
TUBGCP3Q96CW5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TUBGCP3Q96CW5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.93■□□□□ 0.94
TUBGCP3Q96CW5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.93■□□□□ 0.94
TUBGCP3Q96CW5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
TUBGCP3Q96CW5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBGCP3Q96CW5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBGCP3Q96CW5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
TUBGCP3Q96CW5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBGCP3Q96CW5 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBGCP3Q96CW5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBGCP3Q96CW5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBGCP3Q96CW5 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBGCP3Q96CW5 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.92■□□□□ 0.94
TUBGCP3Q96CW5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.92■□□□□ 0.94
TUBGCP3Q96CW5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.92■□□□□ 0.94
TUBGCP3Q96CW5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
TUBGCP3Q96CW5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.92■□□□□ 0.94
TUBGCP3Q96CW5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBGCP3Q96CW5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBGCP3Q96CW5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
TUBGCP3Q96CW5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TUBGCP3Q96CW5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TUBGCP3Q96CW5 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TUBGCP3Q96CW5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.91■□□□□ 0.94
TUBGCP3Q96CW5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
TUBGCP3Q96CW5 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TUBGCP3Q96CW5 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
TUBGCP3Q96CW5 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
TUBGCP3Q96CW5 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.91■□□□□ 0.94
TUBGCP3Q96CW5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.91■□□□□ 0.94
TUBGCP3Q96CW5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TUBGCP3Q96CW5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TUBGCP3Q96CW5 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TUBGCP3Q96CW5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
TUBGCP3Q96CW5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.91■□□□□ 0.94
TUBGCP3Q96CW5 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
TUBGCP3Q96CW5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.9■□□□□ 0.94
TUBGCP3Q96CW5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBGCP3Q96CW5 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBGCP3Q96CW5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBGCP3Q96CW5 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
TUBGCP3Q96CW5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBGCP3Q96CW5 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBGCP3Q96CW5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
TUBGCP3Q96CW5 MIR6724-1-201ENST00000616420 92 ntBASIC20.9■□□□□ 0.94
TUBGCP3Q96CW5 MIR6724-2-201ENST00000616483 92 ntBASIC20.9■□□□□ 0.94
TUBGCP3Q96CW5 MIR6724-4-201ENST00000617390 92 ntBASIC20.9■□□□□ 0.94
TUBGCP3Q96CW5 MIR6724-3-201ENST00000622482 92 ntBASIC20.9■□□□□ 0.94
TUBGCP3Q96CW5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TUBGCP3Q96CW5 AC005229.4-201ENST00000610085 2198 ntBASIC20.9■□□□□ 0.94
TUBGCP3Q96CW5 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
TUBGCP3Q96CW5 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.89■□□□□ 0.94
TUBGCP3Q96CW5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
TUBGCP3Q96CW5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TUBGCP3Q96CW5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.89■□□□□ 0.93
TUBGCP3Q96CW5 AL024507.2-201ENST00000606070 2574 ntBASIC20.89■□□□□ 0.93
TUBGCP3Q96CW5 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TUBGCP3Q96CW5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
TUBGCP3Q96CW5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TUBGCP3Q96CW5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TUBGCP3Q96CW5 AC241377.3-202ENST00000626088 1088 ntBASIC20.89■□□□□ 0.93
TUBGCP3Q96CW5 AC241585.3-202ENST00000628937 1088 ntBASIC20.89■□□□□ 0.93
TUBGCP3Q96CW5 AC245100.8-202ENST00000629247 1058 ntBASIC20.89■□□□□ 0.93
TUBGCP3Q96CW5 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.89■□□□□ 0.93
TUBGCP3Q96CW5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TUBGCP3Q96CW5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TUBGCP3Q96CW5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.89■□□□□ 0.93
TUBGCP3Q96CW5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TUBGCP3Q96CW5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBGCP3Q96CW5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBGCP3Q96CW5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.88■□□□□ 0.93
TUBGCP3Q96CW5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.88■□□□□ 0.93
TUBGCP3Q96CW5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBGCP3Q96CW5 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBGCP3Q96CW5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBGCP3Q96CW5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBGCP3Q96CW5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.88■□□□□ 0.93
TUBGCP3Q96CW5 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.88■□□□□ 0.93
TUBGCP3Q96CW5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBGCP3Q96CW5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBGCP3Q96CW5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TUBGCP3Q96CW5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms