Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 AC128676.1-201ENST00000454392 318 ntBASIC23.32■■□□□ 1.32
TIFAQ96CG3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.32■■□□□ 1.32
TIFAQ96CG3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TIFAQ96CG3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TIFAQ96CG3 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TIFAQ96CG3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.32■■□□□ 1.32
TIFAQ96CG3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TIFAQ96CG3 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
TIFAQ96CG3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TIFAQ96CG3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TIFAQ96CG3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TIFAQ96CG3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.31■■□□□ 1.32
TIFAQ96CG3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TIFAQ96CG3 AC083880.1-201ENST00000608266 535 ntBASIC23.31■■□□□ 1.32
TIFAQ96CG3 AC068338.2-201ENST00000563278 1430 ntBASIC23.31■■□□□ 1.32
TIFAQ96CG3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TIFAQ96CG3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TIFAQ96CG3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TIFAQ96CG3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TIFAQ96CG3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TIFAQ96CG3 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
TIFAQ96CG3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.3■■□□□ 1.32
TIFAQ96CG3 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC23.3■■□□□ 1.32
TIFAQ96CG3 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.3■■□□□ 1.32
TIFAQ96CG3 KRT18P20-201ENST00000548986 1279 ntBASIC23.3■■□□□ 1.32
TIFAQ96CG3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
TIFAQ96CG3 AC135731.1-201ENST00000569415 2548 ntBASIC23.3■■□□□ 1.32
TIFAQ96CG3 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TIFAQ96CG3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TIFAQ96CG3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TIFAQ96CG3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TIFAQ96CG3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TIFAQ96CG3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TIFAQ96CG3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.29■■□□□ 1.32
TIFAQ96CG3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TIFAQ96CG3 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.29■■□□□ 1.32
TIFAQ96CG3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
TIFAQ96CG3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TIFAQ96CG3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.29■■□□□ 1.32
TIFAQ96CG3 MMAB-206ENST00000540016 945 ntTSL 3 BASIC23.29■■□□□ 1.32
TIFAQ96CG3 CBFB-203ENST00000561924 584 ntTSL 5 BASIC23.29■■□□□ 1.32
TIFAQ96CG3 OR10C1-204ENST00000622521 1039 ntBASIC23.29■■□□□ 1.32
TIFAQ96CG3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.29■■□□□ 1.32
TIFAQ96CG3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
TIFAQ96CG3 AC010141.2-201ENST00000452426 721 ntBASIC23.28■■□□□ 1.32
TIFAQ96CG3 TERF1P5-201ENST00000477545 1207 ntBASIC23.28■■□□□ 1.32
TIFAQ96CG3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TIFAQ96CG3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.28■■□□□ 1.32
TIFAQ96CG3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.28■■□□□ 1.32
TIFAQ96CG3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.28■■□□□ 1.32
TIFAQ96CG3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
TIFAQ96CG3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.28■■□□□ 1.32
TIFAQ96CG3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
TIFAQ96CG3 AC020928.2-201ENST00000588717 2197 ntBASIC23.27■■□□□ 1.32
TIFAQ96CG3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
TIFAQ96CG3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
TIFAQ96CG3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TIFAQ96CG3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC23.27■■□□□ 1.32
TIFAQ96CG3 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.27■■□□□ 1.32
TIFAQ96CG3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.27■■□□□ 1.32
TIFAQ96CG3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC23.27■■□□□ 1.32
TIFAQ96CG3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23.27■■□□□ 1.32
TIFAQ96CG3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC23.27■■□□□ 1.32
TIFAQ96CG3 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
TIFAQ96CG3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
TIFAQ96CG3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
TIFAQ96CG3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TIFAQ96CG3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TIFAQ96CG3 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC23.26■■□□□ 1.31
TIFAQ96CG3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
TIFAQ96CG3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
TIFAQ96CG3 MIR1224-201ENST00000408193 85 ntBASIC23.26■■□□□ 1.31
TIFAQ96CG3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
TIFAQ96CG3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC23.26■■□□□ 1.31
TIFAQ96CG3 AC093787.1-201ENST00000450396 207 ntBASIC23.26■■□□□ 1.31
TIFAQ96CG3 AC097658.1-201ENST00000475555 843 ntBASIC23.26■■□□□ 1.31
TIFAQ96CG3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.26■■□□□ 1.31
TIFAQ96CG3 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
TIFAQ96CG3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.26■■□□□ 1.31
TIFAQ96CG3 AC008694.1-202ENST00000636953 945 ntBASIC23.26■■□□□ 1.31
TIFAQ96CG3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TIFAQ96CG3 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TIFAQ96CG3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TIFAQ96CG3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TIFAQ96CG3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.25■■□□□ 1.31
TIFAQ96CG3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TIFAQ96CG3 BX276092.2-201ENST00000417668 665 ntBASIC23.25■■□□□ 1.31
TIFAQ96CG3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC23.25■■□□□ 1.31
TIFAQ96CG3 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.25■■□□□ 1.31
TIFAQ96CG3 AC008550.1-201ENST00000511500 884 ntBASIC23.25■■□□□ 1.31
TIFAQ96CG3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
TIFAQ96CG3 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.25■■□□□ 1.31
TIFAQ96CG3 USP36-216ENST00000589424 970 ntTSL 5 BASIC23.25■■□□□ 1.31
TIFAQ96CG3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.25■■□□□ 1.31
TIFAQ96CG3 MYC-209ENST00000641252 345 ntBASIC23.25■■□□□ 1.31
TIFAQ96CG3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
TIFAQ96CG3 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
TIFAQ96CG3 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.24■■□□□ 1.31
TIFAQ96CG3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
TIFAQ96CG3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms