Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.37■□□□□ 0.69
CPNE4Q96A23 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.37■□□□□ 0.69
CPNE4Q96A23 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.37■□□□□ 0.69
CPNE4Q96A23 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.37■□□□□ 0.69
CPNE4Q96A23 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.37■□□□□ 0.69
CPNE4Q96A23 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE4Q96A23 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPNE4Q96A23 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.36■□□□□ 0.69
CPNE4Q96A23 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CPNE4Q96A23 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE4Q96A23 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE4Q96A23 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE4Q96A23 YBX1P1-201ENST00000445822 960 ntBASIC19.36■□□□□ 0.69
CPNE4Q96A23 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.36■□□□□ 0.69
CPNE4Q96A23 MIR6084-201ENST00000622012 110 ntBASIC19.36■□□□□ 0.69
CPNE4Q96A23 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE4Q96A23 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE4Q96A23 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CPNE4Q96A23 BX005040.4-201ENST00000637145 1518 ntBASIC19.35■□□□□ 0.69
CPNE4Q96A23 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE4Q96A23 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE4Q96A23 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE4Q96A23 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE4Q96A23 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE4Q96A23 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE4Q96A23 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE4Q96A23 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.35■□□□□ 0.69
CPNE4Q96A23 RARRES2P6-201ENST00000567333 442 ntBASIC19.35■□□□□ 0.69
CPNE4Q96A23 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE4Q96A23 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE4Q96A23 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.35■□□□□ 0.69
CPNE4Q96A23 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE4Q96A23 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE4Q96A23 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.35■□□□□ 0.69
CPNE4Q96A23 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE4Q96A23 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE4Q96A23 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE4Q96A23 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CPNE4Q96A23 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE4Q96A23 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE4Q96A23 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE4Q96A23 AC123595.1-201ENST00000440769 1046 ntBASIC19.34■□□□□ 0.69
CPNE4Q96A23 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.34■□□□□ 0.69
CPNE4Q96A23 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
CPNE4Q96A23 AL034346.1-201ENST00000568244 1277 ntBASIC19.34■□□□□ 0.69
CPNE4Q96A23 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.34■□□□□ 0.69
CPNE4Q96A23 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.34■□□□□ 0.69
CPNE4Q96A23 LINC00526-201ENST00000581067 1875 ntBASIC19.34■□□□□ 0.69
CPNE4Q96A23 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CPNE4Q96A23 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE4Q96A23 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE4Q96A23 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE4Q96A23 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE4Q96A23 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE4Q96A23 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.33■□□□□ 0.69
CPNE4Q96A23 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE4Q96A23 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE4Q96A23 AC068473.5-201ENST00000616428 2072 ntBASIC19.33■□□□□ 0.69
CPNE4Q96A23 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CPNE4Q96A23 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE4Q96A23 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CPNE4Q96A23 AC097381.1-201ENST00000429019 1296 ntBASIC19.33■□□□□ 0.68
CPNE4Q96A23 MIR6821-201ENST00000617625 74 ntBASIC19.33■□□□□ 0.68
CPNE4Q96A23 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE4Q96A23 AC139530.1-201ENST00000575312 1977 ntBASIC19.33■□□□□ 0.68
CPNE4Q96A23 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE4Q96A23 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.33■□□□□ 0.68
CPNE4Q96A23 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE4Q96A23 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE4Q96A23 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE4Q96A23 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.32■□□□□ 0.68
CPNE4Q96A23 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE4Q96A23 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.32■□□□□ 0.68
CPNE4Q96A23 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE4Q96A23 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.32■□□□□ 0.68
CPNE4Q96A23 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE4Q96A23 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE4Q96A23 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE4Q96A23 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CPNE4Q96A23 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE4Q96A23 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE4Q96A23 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
CPNE4Q96A23 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE4Q96A23 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.31■□□□□ 0.68
CPNE4Q96A23 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CPNE4Q96A23 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CPNE4Q96A23 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE4Q96A23 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE4Q96A23 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE4Q96A23 LINC02228-203ENST00000641970 1355 ntBASIC19.31■□□□□ 0.68
CPNE4Q96A23 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE4Q96A23 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE4Q96A23 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.3■□□□□ 0.68
CPNE4Q96A23 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE4Q96A23 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE4Q96A23 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.3■□□□□ 0.68
CPNE4Q96A23 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE4Q96A23 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.3■□□□□ 0.68
CPNE4Q96A23 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.3■□□□□ 0.68
CPNE4Q96A23 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms