Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.27■■□□□ 1
HMGCLL1Q8TB92 AC010525.1-201ENST00000585559 441 ntBASIC21.27■■□□□ 1
HMGCLL1Q8TB92 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21.27■■□□□ 1
HMGCLL1Q8TB92 AC068587.7-201ENST00000641602 218 ntBASIC21.27■■□□□ 1
HMGCLL1Q8TB92 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.27■■□□□ 1
HMGCLL1Q8TB92 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.27■■□□□ 1
HMGCLL1Q8TB92 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
HMGCLL1Q8TB92 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
HMGCLL1Q8TB92 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.27■■□□□ 1
HMGCLL1Q8TB92 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
HMGCLL1Q8TB92 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.26■□□□□ 0.99
HMGCLL1Q8TB92 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGCLL1Q8TB92 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
HMGCLL1Q8TB92 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
HMGCLL1Q8TB92 AL136967.2-201ENST00000623968 743 ntBASIC21.26■□□□□ 0.99
HMGCLL1Q8TB92 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.26■□□□□ 0.99
HMGCLL1Q8TB92 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGCLL1Q8TB92 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
HMGCLL1Q8TB92 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGCLL1Q8TB92 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HMGCLL1Q8TB92 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.25■□□□□ 0.99
HMGCLL1Q8TB92 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.25■□□□□ 0.99
HMGCLL1Q8TB92 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGCLL1Q8TB92 AC091305.1-201ENST00000479476 895 ntBASIC21.25■□□□□ 0.99
HMGCLL1Q8TB92 AP005435.1-201ENST00000529293 1178 ntBASIC21.25■□□□□ 0.99
HMGCLL1Q8TB92 AF213884.3-201ENST00000563833 479 ntBASIC21.25■□□□□ 0.99
HMGCLL1Q8TB92 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.25■□□□□ 0.99
HMGCLL1Q8TB92 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.25■□□□□ 0.99
HMGCLL1Q8TB92 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGCLL1Q8TB92 AC026310.3-201ENST00000625186 2373 ntBASIC21.25■□□□□ 0.99
HMGCLL1Q8TB92 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGCLL1Q8TB92 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HMGCLL1Q8TB92 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
HMGCLL1Q8TB92 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
HMGCLL1Q8TB92 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCLL1Q8TB92 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCLL1Q8TB92 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCLL1Q8TB92 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
HMGCLL1Q8TB92 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCLL1Q8TB92 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
HMGCLL1Q8TB92 RASA4CP-201ENST00000424092 1398 ntBASIC21.23■□□□□ 0.99
HMGCLL1Q8TB92 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.23■□□□□ 0.99
HMGCLL1Q8TB92 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
HMGCLL1Q8TB92 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.23■□□□□ 0.99
HMGCLL1Q8TB92 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.23■□□□□ 0.99
HMGCLL1Q8TB92 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCLL1Q8TB92 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCLL1Q8TB92 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCLL1Q8TB92 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCLL1Q8TB92 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
HMGCLL1Q8TB92 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCLL1Q8TB92 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HMGCLL1Q8TB92 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
HMGCLL1Q8TB92 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCLL1Q8TB92 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
HMGCLL1Q8TB92 AC008764.7-201ENST00000593779 1081 ntBASIC21.22■□□□□ 0.99
HMGCLL1Q8TB92 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCLL1Q8TB92 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
HMGCLL1Q8TB92 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.22■□□□□ 0.99
HMGCLL1Q8TB92 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.22■□□□□ 0.99
HMGCLL1Q8TB92 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
HMGCLL1Q8TB92 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.21■□□□□ 0.99
HMGCLL1Q8TB92 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
HMGCLL1Q8TB92 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCLL1Q8TB92 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
HMGCLL1Q8TB92 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
HMGCLL1Q8TB92 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCLL1Q8TB92 AC099791.1-201ENST00000416440 715 ntBASIC21.21■□□□□ 0.99
HMGCLL1Q8TB92 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.21■□□□□ 0.99
HMGCLL1Q8TB92 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.21■□□□□ 0.99
HMGCLL1Q8TB92 AC142381.2-201ENST00000566120 298 ntBASIC21.21■□□□□ 0.99
HMGCLL1Q8TB92 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
HMGCLL1Q8TB92 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.21■□□□□ 0.99
HMGCLL1Q8TB92 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.21■□□□□ 0.99
HMGCLL1Q8TB92 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.99
HMGCLL1Q8TB92 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.2■□□□□ 0.99
HMGCLL1Q8TB92 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCLL1Q8TB92 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCLL1Q8TB92 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCLL1Q8TB92 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCLL1Q8TB92 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
HMGCLL1Q8TB92 AC010542.4-201ENST00000563151 1910 ntBASIC21.2■□□□□ 0.98
HMGCLL1Q8TB92 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCLL1Q8TB92 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
HMGCLL1Q8TB92 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.2■□□□□ 0.98
HMGCLL1Q8TB92 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.2■□□□□ 0.98
HMGCLL1Q8TB92 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.2■□□□□ 0.98
HMGCLL1Q8TB92 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCLL1Q8TB92 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCLL1Q8TB92 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCLL1Q8TB92 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.2■□□□□ 0.98
HMGCLL1Q8TB92 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
HMGCLL1Q8TB92 LINC01960-201ENST00000563759 1884 ntBASIC21.2■□□□□ 0.98
HMGCLL1Q8TB92 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
HMGCLL1Q8TB92 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.19■□□□□ 0.98
HMGCLL1Q8TB92 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCLL1Q8TB92 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
HMGCLL1Q8TB92 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCLL1Q8TB92 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
HMGCLL1Q8TB92 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms