Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
SMARCC2Q8TAQ2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.38■■□□□ 1.65
SMARCC2Q8TAQ2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.38■■□□□ 1.65
SMARCC2Q8TAQ2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.38■■□□□ 1.65
SMARCC2Q8TAQ2 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC25.38■■□□□ 1.65
SMARCC2Q8TAQ2 AC126544.1-201ENST00000580842 1059 ntBASIC25.38■■□□□ 1.65
SMARCC2Q8TAQ2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
SMARCC2Q8TAQ2 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
SMARCC2Q8TAQ2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC25.38■■□□□ 1.65
SMARCC2Q8TAQ2 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SMARCC2Q8TAQ2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SMARCC2Q8TAQ2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SMARCC2Q8TAQ2 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SMARCC2Q8TAQ2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SMARCC2Q8TAQ2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
SMARCC2Q8TAQ2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
SMARCC2Q8TAQ2 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMARCC2Q8TAQ2 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
SMARCC2Q8TAQ2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMARCC2Q8TAQ2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
SMARCC2Q8TAQ2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
SMARCC2Q8TAQ2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
SMARCC2Q8TAQ2 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.36■■□□□ 1.65
SMARCC2Q8TAQ2 OR2I1P-207ENST00000453522 948 ntBASIC25.36■■□□□ 1.65
SMARCC2Q8TAQ2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.36■■□□□ 1.65
SMARCC2Q8TAQ2 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
SMARCC2Q8TAQ2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SMARCC2Q8TAQ2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.35■■□□□ 1.65
SMARCC2Q8TAQ2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SMARCC2Q8TAQ2 USP45-205ENST00000472914 1617 ntTSL 5 BASIC25.35■■□□□ 1.65
SMARCC2Q8TAQ2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
SMARCC2Q8TAQ2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
SMARCC2Q8TAQ2 MIR935-201ENST00000401179 91 ntBASIC25.35■■□□□ 1.65
SMARCC2Q8TAQ2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.35■■□□□ 1.65
SMARCC2Q8TAQ2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.35■■□□□ 1.65
SMARCC2Q8TAQ2 AC010525.1-201ENST00000585559 441 ntBASIC25.35■■□□□ 1.65
SMARCC2Q8TAQ2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.35■■□□□ 1.65
SMARCC2Q8TAQ2 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.35■■□□□ 1.65
SMARCC2Q8TAQ2 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SMARCC2Q8TAQ2 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
SMARCC2Q8TAQ2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC25.35■■□□□ 1.65
SMARCC2Q8TAQ2 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SMARCC2Q8TAQ2 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.34■■□□□ 1.65
SMARCC2Q8TAQ2 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SMARCC2Q8TAQ2 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC25.34■■□□□ 1.65
SMARCC2Q8TAQ2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.34■■□□□ 1.65
SMARCC2Q8TAQ2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SMARCC2Q8TAQ2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC25.34■■□□□ 1.65
SMARCC2Q8TAQ2 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SMARCC2Q8TAQ2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
SMARCC2Q8TAQ2 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25.34■■□□□ 1.65
SMARCC2Q8TAQ2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SMARCC2Q8TAQ2 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SMARCC2Q8TAQ2 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
SMARCC2Q8TAQ2 EI24-211ENST00000534546 1544 ntTSL 2 BASIC25.33■■□□□ 1.65
SMARCC2Q8TAQ2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SMARCC2Q8TAQ2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC25.33■■□□□ 1.65
SMARCC2Q8TAQ2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
SMARCC2Q8TAQ2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.33■■□□□ 1.65
SMARCC2Q8TAQ2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.33■■□□□ 1.65
SMARCC2Q8TAQ2 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC25.33■■□□□ 1.65
SMARCC2Q8TAQ2 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMARCC2Q8TAQ2 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
SMARCC2Q8TAQ2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
SMARCC2Q8TAQ2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
SMARCC2Q8TAQ2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMARCC2Q8TAQ2 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMARCC2Q8TAQ2 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
SMARCC2Q8TAQ2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
SMARCC2Q8TAQ2 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC25.32■■□□□ 1.64
SMARCC2Q8TAQ2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC2Q8TAQ2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC2Q8TAQ2 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC2Q8TAQ2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC2Q8TAQ2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC2Q8TAQ2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.31■■□□□ 1.64
SMARCC2Q8TAQ2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC25.31■■□□□ 1.64
SMARCC2Q8TAQ2 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC2Q8TAQ2 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC2Q8TAQ2 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC2Q8TAQ2 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC2Q8TAQ2 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
SMARCC2Q8TAQ2 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMARCC2Q8TAQ2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC25.3■■□□□ 1.64
SMARCC2Q8TAQ2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMARCC2Q8TAQ2 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC25.3■■□□□ 1.64
SMARCC2Q8TAQ2 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
SMARCC2Q8TAQ2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMARCC2Q8TAQ2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMARCC2Q8TAQ2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMARCC2Q8TAQ2 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMARCC2Q8TAQ2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SMARCC2Q8TAQ2 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.3■■□□□ 1.64
SMARCC2Q8TAQ2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SMARCC2Q8TAQ2 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.3■■□□□ 1.64
SMARCC2Q8TAQ2 AC079089.2-201ENST00000531211 1277 ntBASIC25.3■■□□□ 1.64
SMARCC2Q8TAQ2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
SMARCC2Q8TAQ2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SMARCC2Q8TAQ2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
SMARCC2Q8TAQ2 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms