Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
SVIPQ8NHG7 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 LINC01922-201ENST00000562582 719 ntBASIC13.69□□□□□ -0.22
SVIPQ8NHG7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SVIPQ8NHG7 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
SVIPQ8NHG7 AC145676.1-201ENST00000514988 2004 ntBASIC13.68□□□□□ -0.22
SVIPQ8NHG7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.67□□□□□ -0.22
SVIPQ8NHG7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SVIPQ8NHG7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms