Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC25.22■■□□□ 1.63
PNMA1Q8ND90 KRT18P14-201ENST00000534205 1250 ntBASIC25.22■■□□□ 1.63
PNMA1Q8ND90 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
PNMA1Q8ND90 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PNMA1Q8ND90 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PNMA1Q8ND90 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
PNMA1Q8ND90 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
PNMA1Q8ND90 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.21■■□□□ 1.63
PNMA1Q8ND90 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
PNMA1Q8ND90 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PNMA1Q8ND90 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PNMA1Q8ND90 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.21■■□□□ 1.63
PNMA1Q8ND90 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
PNMA1Q8ND90 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PNMA1Q8ND90 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PNMA1Q8ND90 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PNMA1Q8ND90 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC25.21■■□□□ 1.63
PNMA1Q8ND90 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PNMA1Q8ND90 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PNMA1Q8ND90 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PNMA1Q8ND90 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PNMA1Q8ND90 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.21■■□□□ 1.63
PNMA1Q8ND90 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.2■■□□□ 1.63
PNMA1Q8ND90 AP004607.7-201ENST00000527152 1677 ntBASIC25.2■■□□□ 1.63
PNMA1Q8ND90 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC25.2■■□□□ 1.63
PNMA1Q8ND90 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.62
PNMA1Q8ND90 TERT-206ENST00000508104 2486 ntTSL 5 BASIC25.2■■□□□ 1.62
PNMA1Q8ND90 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PNMA1Q8ND90 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
PNMA1Q8ND90 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC25.2■■□□□ 1.62
PNMA1Q8ND90 PXK-203ENST00000383715 1756 ntTSL 5 BASIC25.2■■□□□ 1.62
PNMA1Q8ND90 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PNMA1Q8ND90 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
PNMA1Q8ND90 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC25.2■■□□□ 1.62
PNMA1Q8ND90 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PNMA1Q8ND90 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PNMA1Q8ND90 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PNMA1Q8ND90 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
PNMA1Q8ND90 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PNMA1Q8ND90 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC25.19■■□□□ 1.62
PNMA1Q8ND90 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.19■■□□□ 1.62
PNMA1Q8ND90 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC25.19■■□□□ 1.62
PNMA1Q8ND90 AL162430.1-201ENST00000480705 870 ntBASIC25.19■■□□□ 1.62
PNMA1Q8ND90 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC25.19■■□□□ 1.62
PNMA1Q8ND90 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PNMA1Q8ND90 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PNMA1Q8ND90 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC25.18■■□□□ 1.62
PNMA1Q8ND90 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PNMA1Q8ND90 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PNMA1Q8ND90 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC25.18■■□□□ 1.62
PNMA1Q8ND90 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PNMA1Q8ND90 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
PNMA1Q8ND90 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PNMA1Q8ND90 AC005224.4-201ENST00000583262 1652 ntBASIC25.17■■□□□ 1.62
PNMA1Q8ND90 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PNMA1Q8ND90 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PNMA1Q8ND90 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PNMA1Q8ND90 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
PNMA1Q8ND90 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PNMA1Q8ND90 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
PNMA1Q8ND90 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC25.17■■□□□ 1.62
PNMA1Q8ND90 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PNMA1Q8ND90 AC009237.3-201ENST00000393279 1427 ntBASIC25.17■■□□□ 1.62
PNMA1Q8ND90 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
PNMA1Q8ND90 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
PNMA1Q8ND90 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
PNMA1Q8ND90 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PNMA1Q8ND90 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PNMA1Q8ND90 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.17■■□□□ 1.62
PNMA1Q8ND90 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PNMA1Q8ND90 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PNMA1Q8ND90 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC25.16■■□□□ 1.62
PNMA1Q8ND90 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PNMA1Q8ND90 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
PNMA1Q8ND90 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC25.16■■□□□ 1.62
PNMA1Q8ND90 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC25.16■■□□□ 1.62
PNMA1Q8ND90 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC25.16■■□□□ 1.62
PNMA1Q8ND90 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.16■■□□□ 1.62
PNMA1Q8ND90 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC25.16■■□□□ 1.62
PNMA1Q8ND90 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.16■■□□□ 1.62
PNMA1Q8ND90 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PNMA1Q8ND90 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
PNMA1Q8ND90 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PNMA1Q8ND90 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PNMA1Q8ND90 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PNMA1Q8ND90 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PNMA1Q8ND90 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PNMA1Q8ND90 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
PNMA1Q8ND90 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.15■■□□□ 1.62
PNMA1Q8ND90 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.15■■□□□ 1.62
PNMA1Q8ND90 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.15■■□□□ 1.62
PNMA1Q8ND90 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.15■■□□□ 1.62
PNMA1Q8ND90 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
PNMA1Q8ND90 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC25.15■■□□□ 1.62
PNMA1Q8ND90 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PNMA1Q8ND90 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC25.15■■□□□ 1.62
PNMA1Q8ND90 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
PNMA1Q8ND90 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PNMA1Q8ND90 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
PNMA1Q8ND90 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms