Protein–RNA interactions for Protein: Q8N328

PGBD3, PiggyBac transposable element-derived protein 3, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD3Q8N328 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PGBD3Q8N328 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PGBD3Q8N328 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PGBD3Q8N328 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.94■■□□□ 1.1
PGBD3Q8N328 KRT18P11-201ENST00000435214 1283 ntBASIC21.94■■□□□ 1.1
PGBD3Q8N328 AC011767.1-201ENST00000617410 1153 ntBASIC21.94■■□□□ 1.1
PGBD3Q8N328 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.94■■□□□ 1.1
PGBD3Q8N328 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PGBD3Q8N328 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PGBD3Q8N328 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.94■■□□□ 1.1
PGBD3Q8N328 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.94■■□□□ 1.1
PGBD3Q8N328 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PGBD3Q8N328 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.94■■□□□ 1.1
PGBD3Q8N328 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PGBD3Q8N328 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.93■■□□□ 1.1
PGBD3Q8N328 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PGBD3Q8N328 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PGBD3Q8N328 DUSP8P5-201ENST00000422884 1815 ntBASIC21.93■■□□□ 1.1
PGBD3Q8N328 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.93■■□□□ 1.1
PGBD3Q8N328 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.93■■□□□ 1.1
PGBD3Q8N328 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PGBD3Q8N328 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.93■■□□□ 1.1
PGBD3Q8N328 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PGBD3Q8N328 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.93■■□□□ 1.1
PGBD3Q8N328 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PGBD3Q8N328 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PGBD3Q8N328 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.93■■□□□ 1.1
PGBD3Q8N328 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PGBD3Q8N328 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
PGBD3Q8N328 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
PGBD3Q8N328 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PGBD3Q8N328 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
PGBD3Q8N328 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PGBD3Q8N328 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PGBD3Q8N328 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PGBD3Q8N328 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.92■■□□□ 1.1
PGBD3Q8N328 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PGBD3Q8N328 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.92■■□□□ 1.1
PGBD3Q8N328 AL109923.1-201ENST00000618799 583 ntBASIC21.92■■□□□ 1.1
PGBD3Q8N328 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PGBD3Q8N328 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
PGBD3Q8N328 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PGBD3Q8N328 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PGBD3Q8N328 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PGBD3Q8N328 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.91■■□□□ 1.1
PGBD3Q8N328 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.91■■□□□ 1.1
PGBD3Q8N328 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PGBD3Q8N328 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PGBD3Q8N328 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PGBD3Q8N328 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC21.91■■□□□ 1.1
PGBD3Q8N328 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.91■■□□□ 1.1
PGBD3Q8N328 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PGBD3Q8N328 AL355802.2-201ENST00000402069 882 ntBASIC21.91■■□□□ 1.1
PGBD3Q8N328 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC21.91■■□□□ 1.1
PGBD3Q8N328 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.91■■□□□ 1.1
PGBD3Q8N328 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PGBD3Q8N328 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.91■■□□□ 1.1
PGBD3Q8N328 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.91■■□□□ 1.1
PGBD3Q8N328 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PGBD3Q8N328 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PGBD3Q8N328 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.9■■□□□ 1.1
PGBD3Q8N328 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PGBD3Q8N328 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PGBD3Q8N328 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PGBD3Q8N328 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PGBD3Q8N328 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.9■■□□□ 1.1
PGBD3Q8N328 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.9■■□□□ 1.1
PGBD3Q8N328 AC104771.1-201ENST00000603335 964 ntBASIC21.9■■□□□ 1.1
PGBD3Q8N328 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.9■■□□□ 1.1
PGBD3Q8N328 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PGBD3Q8N328 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PGBD3Q8N328 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PGBD3Q8N328 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PGBD3Q8N328 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.9■■□□□ 1.1
PGBD3Q8N328 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PGBD3Q8N328 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PGBD3Q8N328 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PGBD3Q8N328 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PGBD3Q8N328 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PGBD3Q8N328 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.89■■□□□ 1.09
PGBD3Q8N328 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
PGBD3Q8N328 CROCCP5-201ENST00000436658 830 ntBASIC21.89■■□□□ 1.09
PGBD3Q8N328 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.89■■□□□ 1.09
PGBD3Q8N328 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PGBD3Q8N328 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PGBD3Q8N328 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
PGBD3Q8N328 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
PGBD3Q8N328 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PGBD3Q8N328 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.89■■□□□ 1.09
PGBD3Q8N328 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PGBD3Q8N328 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
PGBD3Q8N328 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
PGBD3Q8N328 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PGBD3Q8N328 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.88■■□□□ 1.09
PGBD3Q8N328 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PGBD3Q8N328 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.88■■□□□ 1.09
PGBD3Q8N328 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.88■■□□□ 1.09
PGBD3Q8N328 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PGBD3Q8N328 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PGBD3Q8N328 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms