Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.81■□□□□ 0.76
PTCHD4Q6ZW05 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTCHD4Q6ZW05 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PTCHD4Q6ZW05 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.8■□□□□ 0.76
PTCHD4Q6ZW05 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PTCHD4Q6ZW05 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTCHD4Q6ZW05 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTCHD4Q6ZW05 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.8■□□□□ 0.76
PTCHD4Q6ZW05 AC239859.2-201ENST00000444165 318 ntBASIC19.8■□□□□ 0.76
PTCHD4Q6ZW05 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTCHD4Q6ZW05 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.8■□□□□ 0.76
PTCHD4Q6ZW05 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTCHD4Q6ZW05 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
PTCHD4Q6ZW05 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTCHD4Q6ZW05 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.8■□□□□ 0.76
PTCHD4Q6ZW05 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PTCHD4Q6ZW05 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.79■□□□□ 0.76
PTCHD4Q6ZW05 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTCHD4Q6ZW05 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.79■□□□□ 0.76
PTCHD4Q6ZW05 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTCHD4Q6ZW05 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PTCHD4Q6ZW05 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.79■□□□□ 0.76
PTCHD4Q6ZW05 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.79■□□□□ 0.76
PTCHD4Q6ZW05 AC009299.2-201ENST00000482477 511 ntBASIC19.79■□□□□ 0.76
PTCHD4Q6ZW05 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.79■□□□□ 0.76
PTCHD4Q6ZW05 MTDHP2-201ENST00000601468 714 ntBASIC19.79■□□□□ 0.76
PTCHD4Q6ZW05 AC009086.3-201ENST00000623486 1008 ntBASIC19.79■□□□□ 0.76
PTCHD4Q6ZW05 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.79■□□□□ 0.76
PTCHD4Q6ZW05 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTCHD4Q6ZW05 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.79■□□□□ 0.76
PTCHD4Q6ZW05 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTCHD4Q6ZW05 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PTCHD4Q6ZW05 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTCHD4Q6ZW05 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTCHD4Q6ZW05 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PTCHD4Q6ZW05 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTCHD4Q6ZW05 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTCHD4Q6ZW05 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTCHD4Q6ZW05 AC009102.2-201ENST00000606772 1639 ntBASIC19.78■□□□□ 0.76
PTCHD4Q6ZW05 AL451085.2-201ENST00000605085 799 ntBASIC19.78■□□□□ 0.76
PTCHD4Q6ZW05 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PTCHD4Q6ZW05 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.78■□□□□ 0.76
PTCHD4Q6ZW05 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTCHD4Q6ZW05 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.78■□□□□ 0.76
PTCHD4Q6ZW05 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PTCHD4Q6ZW05 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTCHD4Q6ZW05 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTCHD4Q6ZW05 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTCHD4Q6ZW05 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PTCHD4Q6ZW05 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTCHD4Q6ZW05 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PTCHD4Q6ZW05 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.77■□□□□ 0.76
PTCHD4Q6ZW05 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTCHD4Q6ZW05 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.77■□□□□ 0.76
PTCHD4Q6ZW05 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.77■□□□□ 0.76
PTCHD4Q6ZW05 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PTCHD4Q6ZW05 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
PTCHD4Q6ZW05 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.77■□□□□ 0.75
PTCHD4Q6ZW05 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
PTCHD4Q6ZW05 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
PTCHD4Q6ZW05 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 TSPY9P-201ENST00000440215 945 ntBASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 TSPY11P-201ENST00000442607 1045 ntBASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
PTCHD4Q6ZW05 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms