Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF111Q6ZNA4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF111Q6ZNA4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF111Q6ZNA4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RNF111Q6ZNA4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF111Q6ZNA4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF111Q6ZNA4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF111Q6ZNA4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF111Q6ZNA4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF111Q6ZNA4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF111Q6ZNA4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF111Q6ZNA4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.93■□□□□ 0.94
RNF111Q6ZNA4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF111Q6ZNA4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF111Q6ZNA4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF111Q6ZNA4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF111Q6ZNA4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF111Q6ZNA4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF111Q6ZNA4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF111Q6ZNA4 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF111Q6ZNA4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF111Q6ZNA4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF111Q6ZNA4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF111Q6ZNA4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF111Q6ZNA4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF111Q6ZNA4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RNF111Q6ZNA4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF111Q6ZNA4 SRD5A1P1-201ENST00000442297 786 ntBASIC20.92■□□□□ 0.94
RNF111Q6ZNA4 MIR4466-201ENST00000606121 54 ntBASIC20.92■□□□□ 0.94
RNF111Q6ZNA4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF111Q6ZNA4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF111Q6ZNA4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF111Q6ZNA4 C17orf82-201ENST00000623772 1530 ntBASIC20.92■□□□□ 0.94
RNF111Q6ZNA4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF111Q6ZNA4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF111Q6ZNA4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF111Q6ZNA4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.92■□□□□ 0.94
RNF111Q6ZNA4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
RNF111Q6ZNA4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
RNF111Q6ZNA4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
RNF111Q6ZNA4 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF111Q6ZNA4 AL136116.3-201ENST00000402907 1138 ntBASIC20.91■□□□□ 0.94
RNF111Q6ZNA4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
RNF111Q6ZNA4 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF111Q6ZNA4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.91■□□□□ 0.94
RNF111Q6ZNA4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RNF111Q6ZNA4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.91■□□□□ 0.94
RNF111Q6ZNA4 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.91■□□□□ 0.94
RNF111Q6ZNA4 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF111Q6ZNA4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF111Q6ZNA4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF111Q6ZNA4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF111Q6ZNA4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF111Q6ZNA4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF111Q6ZNA4 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.9■□□□□ 0.94
RNF111Q6ZNA4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RNF111Q6ZNA4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF111Q6ZNA4 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF111Q6ZNA4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RNF111Q6ZNA4 RNF165-205ENST00000588679 2904 ntBASIC20.9■□□□□ 0.94
RNF111Q6ZNA4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RNF111Q6ZNA4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.9■□□□□ 0.94
RNF111Q6ZNA4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
RNF111Q6ZNA4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
RNF111Q6ZNA4 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
RNF111Q6ZNA4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF111Q6ZNA4 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
RNF111Q6ZNA4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
RNF111Q6ZNA4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.89■□□□□ 0.94
RNF111Q6ZNA4 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
RNF111Q6ZNA4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
RNF111Q6ZNA4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF111Q6ZNA4 AL353803.4-201ENST00000565882 1934 ntBASIC20.89■□□□□ 0.93
RNF111Q6ZNA4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF111Q6ZNA4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
RNF111Q6ZNA4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.89■□□□□ 0.93
RNF111Q6ZNA4 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.89■□□□□ 0.93
RNF111Q6ZNA4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
RNF111Q6ZNA4 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.88■□□□□ 0.93
RNF111Q6ZNA4 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.88■□□□□ 0.93
RNF111Q6ZNA4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF111Q6ZNA4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RNF111Q6ZNA4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RNF111Q6ZNA4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
RNF111Q6ZNA4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
RNF111Q6ZNA4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF111Q6ZNA4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF111Q6ZNA4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RNF111Q6ZNA4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF111Q6ZNA4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
RNF111Q6ZNA4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
RNF111Q6ZNA4 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF111Q6ZNA4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF111Q6ZNA4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF111Q6ZNA4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF111Q6ZNA4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
RNF111Q6ZNA4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.86■□□□□ 0.93
RNF111Q6ZNA4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF111Q6ZNA4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF111Q6ZNA4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms