Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
NIPAL3Q6P499 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.63■□□□□ 0.73
NIPAL3Q6P499 AC026310.3-201ENST00000625186 2373 ntBASIC19.63■□□□□ 0.73
NIPAL3Q6P499 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NIPAL3Q6P499 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NIPAL3Q6P499 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NIPAL3Q6P499 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
NIPAL3Q6P499 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.63■□□□□ 0.73
NIPAL3Q6P499 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.63■□□□□ 0.73
NIPAL3Q6P499 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NIPAL3Q6P499 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
NIPAL3Q6P499 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.63■□□□□ 0.73
NIPAL3Q6P499 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
NIPAL3Q6P499 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NIPAL3Q6P499 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.63■□□□□ 0.73
NIPAL3Q6P499 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NIPAL3Q6P499 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NIPAL3Q6P499 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 AC096631.2-201ENST00000436136 790 ntBASIC19.62■□□□□ 0.73
NIPAL3Q6P499 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 AL138724.1-201ENST00000606771 1088 ntBASIC19.62■□□□□ 0.73
NIPAL3Q6P499 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.62■□□□□ 0.73
NIPAL3Q6P499 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
NIPAL3Q6P499 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NIPAL3Q6P499 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.61■□□□□ 0.73
NIPAL3Q6P499 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.61■□□□□ 0.73
NIPAL3Q6P499 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NIPAL3Q6P499 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.61■□□□□ 0.73
NIPAL3Q6P499 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NIPAL3Q6P499 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
NIPAL3Q6P499 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NIPAL3Q6P499 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NIPAL3Q6P499 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NIPAL3Q6P499 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
NIPAL3Q6P499 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NIPAL3Q6P499 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NIPAL3Q6P499 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NIPAL3Q6P499 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.6■□□□□ 0.73
NIPAL3Q6P499 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NIPAL3Q6P499 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NIPAL3Q6P499 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NIPAL3Q6P499 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
NIPAL3Q6P499 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NIPAL3Q6P499 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.6■□□□□ 0.73
NIPAL3Q6P499 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.6■□□□□ 0.73
NIPAL3Q6P499 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
NIPAL3Q6P499 AL136162.1-201ENST00000607711 1078 ntBASIC19.6■□□□□ 0.73
NIPAL3Q6P499 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NIPAL3Q6P499 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NIPAL3Q6P499 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NIPAL3Q6P499 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.6■□□□□ 0.73
NIPAL3Q6P499 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
NIPAL3Q6P499 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.59■□□□□ 0.73
NIPAL3Q6P499 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
NIPAL3Q6P499 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NIPAL3Q6P499 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.59■□□□□ 0.73
NIPAL3Q6P499 AC011298.3-201ENST00000615796 283 ntBASIC19.59■□□□□ 0.73
NIPAL3Q6P499 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.59■□□□□ 0.73
NIPAL3Q6P499 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NIPAL3Q6P499 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NIPAL3Q6P499 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.59■□□□□ 0.73
NIPAL3Q6P499 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
NIPAL3Q6P499 AL024507.2-201ENST00000606070 2574 ntBASIC19.58■□□□□ 0.73
NIPAL3Q6P499 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
NIPAL3Q6P499 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NIPAL3Q6P499 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
NIPAL3Q6P499 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
NIPAL3Q6P499 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.58■□□□□ 0.72
NIPAL3Q6P499 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NIPAL3Q6P499 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NIPAL3Q6P499 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NIPAL3Q6P499 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NIPAL3Q6P499 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NIPAL3Q6P499 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NIPAL3Q6P499 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NIPAL3Q6P499 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.57■□□□□ 0.72
NIPAL3Q6P499 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NIPAL3Q6P499 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.57■□□□□ 0.72
NIPAL3Q6P499 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.57■□□□□ 0.72
NIPAL3Q6P499 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.57■□□□□ 0.72
NIPAL3Q6P499 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NIPAL3Q6P499 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NIPAL3Q6P499 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms