Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPRIN2Q6IMN6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.74■■□□□ 1.07
CAPRIN2Q6IMN6 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CAPRIN2Q6IMN6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CAPRIN2Q6IMN6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CAPRIN2Q6IMN6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
CAPRIN2Q6IMN6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.74■■□□□ 1.07
CAPRIN2Q6IMN6 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.74■■□□□ 1.07
CAPRIN2Q6IMN6 AC005837.3-201ENST00000612163 286 ntBASIC21.74■■□□□ 1.07
CAPRIN2Q6IMN6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CAPRIN2Q6IMN6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPRIN2Q6IMN6 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.74■■□□□ 1.07
CAPRIN2Q6IMN6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPRIN2Q6IMN6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CAPRIN2Q6IMN6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CAPRIN2Q6IMN6 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPRIN2Q6IMN6 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.73■■□□□ 1.07
CAPRIN2Q6IMN6 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.73■■□□□ 1.07
CAPRIN2Q6IMN6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.73■■□□□ 1.07
CAPRIN2Q6IMN6 AC136469.2-201ENST00000623944 1028 ntBASIC21.73■■□□□ 1.07
CAPRIN2Q6IMN6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPRIN2Q6IMN6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.73■■□□□ 1.07
CAPRIN2Q6IMN6 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CAPRIN2Q6IMN6 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CAPRIN2Q6IMN6 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CAPRIN2Q6IMN6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CAPRIN2Q6IMN6 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPRIN2Q6IMN6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.72■■□□□ 1.07
CAPRIN2Q6IMN6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CAPRIN2Q6IMN6 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.72■■□□□ 1.07
CAPRIN2Q6IMN6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPRIN2Q6IMN6 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPRIN2Q6IMN6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPRIN2Q6IMN6 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPRIN2Q6IMN6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPRIN2Q6IMN6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.72■■□□□ 1.07
CAPRIN2Q6IMN6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPRIN2Q6IMN6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CAPRIN2Q6IMN6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CAPRIN2Q6IMN6 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
CAPRIN2Q6IMN6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPRIN2Q6IMN6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPRIN2Q6IMN6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CAPRIN2Q6IMN6 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
CAPRIN2Q6IMN6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CAPRIN2Q6IMN6 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CAPRIN2Q6IMN6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CAPRIN2Q6IMN6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CAPRIN2Q6IMN6 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
CAPRIN2Q6IMN6 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.71■■□□□ 1.07
CAPRIN2Q6IMN6 MIR4767-201ENST00000582827 78 ntBASIC21.71■■□□□ 1.07
CAPRIN2Q6IMN6 AL031432.3-201ENST00000607698 485 ntBASIC21.71■■□□□ 1.07
CAPRIN2Q6IMN6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CAPRIN2Q6IMN6 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CAPRIN2Q6IMN6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CAPRIN2Q6IMN6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.7■■□□□ 1.07
CAPRIN2Q6IMN6 AC133637.1-201ENST00000624115 1537 ntBASIC21.7■■□□□ 1.07
CAPRIN2Q6IMN6 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CAPRIN2Q6IMN6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CAPRIN2Q6IMN6 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CAPRIN2Q6IMN6 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CAPRIN2Q6IMN6 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.7■■□□□ 1.06
CAPRIN2Q6IMN6 EDA-201ENST00000338901 1233 ntBASIC21.7■■□□□ 1.06
CAPRIN2Q6IMN6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CAPRIN2Q6IMN6 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.7■■□□□ 1.06
CAPRIN2Q6IMN6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CAPRIN2Q6IMN6 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CAPRIN2Q6IMN6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
CAPRIN2Q6IMN6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.7■■□□□ 1.06
CAPRIN2Q6IMN6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.69■■□□□ 1.06
CAPRIN2Q6IMN6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CAPRIN2Q6IMN6 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
CAPRIN2Q6IMN6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.68■■□□□ 1.06
CAPRIN2Q6IMN6 AC092666.2-201ENST00000613287 246 ntBASIC21.68■■□□□ 1.06
CAPRIN2Q6IMN6 AL355001.2-201ENST00000620617 1191 ntBASIC21.68■■□□□ 1.06
CAPRIN2Q6IMN6 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CAPRIN2Q6IMN6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CAPRIN2Q6IMN6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.68■■□□□ 1.06
CAPRIN2Q6IMN6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CAPRIN2Q6IMN6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms