Protein–RNA interactions for Protein: Q5VXM1

CDCP2, CUB domain-containing protein 2, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP2Q5VXM1 AF201337.1-201ENST00000520239 748 ntBASIC20.69■□□□□ 0.9
CDCP2Q5VXM1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.69■□□□□ 0.9
CDCP2Q5VXM1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.69■□□□□ 0.9
CDCP2Q5VXM1 MIR4651-201ENST00000582622 73 ntBASIC20.69■□□□□ 0.9
CDCP2Q5VXM1 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCP2Q5VXM1 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CDCP2Q5VXM1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.69■□□□□ 0.9
CDCP2Q5VXM1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.69■□□□□ 0.9
CDCP2Q5VXM1 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCP2Q5VXM1 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCP2Q5VXM1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.68■□□□□ 0.9
CDCP2Q5VXM1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CDCP2Q5VXM1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
CDCP2Q5VXM1 AC133041.1-202ENST00000642053 222 ntBASIC20.68■□□□□ 0.9
CDCP2Q5VXM1 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDCP2Q5VXM1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCP2Q5VXM1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCP2Q5VXM1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDCP2Q5VXM1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCP2Q5VXM1 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CDCP2Q5VXM1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCP2Q5VXM1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CDCP2Q5VXM1 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDCP2Q5VXM1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCP2Q5VXM1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.67■□□□□ 0.9
CDCP2Q5VXM1 AC010141.2-201ENST00000452426 721 ntBASIC20.67■□□□□ 0.9
CDCP2Q5VXM1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.67■□□□□ 0.9
CDCP2Q5VXM1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.67■□□□□ 0.9
CDCP2Q5VXM1 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.67■□□□□ 0.9
CDCP2Q5VXM1 KRT18P20-201ENST00000548986 1279 ntBASIC20.67■□□□□ 0.9
CDCP2Q5VXM1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.67■□□□□ 0.9
CDCP2Q5VXM1 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDCP2Q5VXM1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCP2Q5VXM1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CDCP2Q5VXM1 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.66■□□□□ 0.9
CDCP2Q5VXM1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CDCP2Q5VXM1 AC138907.5-202ENST00000569484 235 ntBASIC20.66■□□□□ 0.9
CDCP2Q5VXM1 AC010536.3-201ENST00000620306 533 ntBASIC20.66■□□□□ 0.9
CDCP2Q5VXM1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.66■□□□□ 0.9
CDCP2Q5VXM1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.66■□□□□ 0.9
CDCP2Q5VXM1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCP2Q5VXM1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.66■□□□□ 0.9
CDCP2Q5VXM1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDCP2Q5VXM1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDCP2Q5VXM1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
CDCP2Q5VXM1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
CDCP2Q5VXM1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CDCP2Q5VXM1 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.65■□□□□ 0.9
CDCP2Q5VXM1 AC105036.2-201ENST00000569468 176 ntBASIC20.65■□□□□ 0.9
CDCP2Q5VXM1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.65■□□□□ 0.9
CDCP2Q5VXM1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.65■□□□□ 0.9
CDCP2Q5VXM1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCP2Q5VXM1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CDCP2Q5VXM1 DUSP8P5-201ENST00000422884 1815 ntBASIC20.64■□□□□ 0.9
CDCP2Q5VXM1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CDCP2Q5VXM1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CDCP2Q5VXM1 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDCP2Q5VXM1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.64■□□□□ 0.89
CDCP2Q5VXM1 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.64■□□□□ 0.89
CDCP2Q5VXM1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDCP2Q5VXM1 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CDCP2Q5VXM1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDCP2Q5VXM1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.64■□□□□ 0.89
CDCP2Q5VXM1 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CDCP2Q5VXM1 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CDCP2Q5VXM1 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CDCP2Q5VXM1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CDCP2Q5VXM1 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCP2Q5VXM1 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
CDCP2Q5VXM1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCP2Q5VXM1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCP2Q5VXM1 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.63■□□□□ 0.89
CDCP2Q5VXM1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDCP2Q5VXM1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
CDCP2Q5VXM1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDCP2Q5VXM1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.63■□□□□ 0.89
CDCP2Q5VXM1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.63■□□□□ 0.89
CDCP2Q5VXM1 FAM201B-201ENST00000458407 597 ntBASIC20.63■□□□□ 0.89
CDCP2Q5VXM1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CDCP2Q5VXM1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.63■□□□□ 0.89
CDCP2Q5VXM1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDCP2Q5VXM1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCP2Q5VXM1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.62■□□□□ 0.89
CDCP2Q5VXM1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCP2Q5VXM1 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDCP2Q5VXM1 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCP2Q5VXM1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDCP2Q5VXM1 AC079089.2-201ENST00000531211 1277 ntBASIC20.62■□□□□ 0.89
CDCP2Q5VXM1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.62■□□□□ 0.89
CDCP2Q5VXM1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDCP2Q5VXM1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCP2Q5VXM1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.62■□□□□ 0.89
CDCP2Q5VXM1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCP2Q5VXM1 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
CDCP2Q5VXM1 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDCP2Q5VXM1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDCP2Q5VXM1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDCP2Q5VXM1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDCP2Q5VXM1 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.61■□□□□ 0.89
CDCP2Q5VXM1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms